Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ushbp1Q8R370 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ushbp1Q8R370 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Ushbp1Q8R370 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ushbp1Q8R370 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Ushbp1Q8R370 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ushbp1Q8R370 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ushbp1Q8R370 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC13.99□□□□□ -0.17
Ushbp1Q8R370 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ushbp1Q8R370 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ushbp1Q8R370 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ushbp1Q8R370 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC13.99□□□□□ -0.17
Ushbp1Q8R370 Gm8228-201ENSMUST00000189949 2192 ntBASIC13.99□□□□□ -0.17
Ushbp1Q8R370 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ushbp1Q8R370 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
Ushbp1Q8R370 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ushbp1Q8R370 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ushbp1Q8R370 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ushbp1Q8R370 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Ushbp1Q8R370 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ushbp1Q8R370 Gm43721-201ENSMUST00000199677 2313 ntBASIC13.98□□□□□ -0.17
Ushbp1Q8R370 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ushbp1Q8R370 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ushbp1Q8R370 AC164107.1-201ENSMUST00000227730 2161 ntBASIC13.98□□□□□ -0.17
Ushbp1Q8R370 Gm6015-201ENSMUST00000217493 1586 ntBASIC13.98□□□□□ -0.17
Ushbp1Q8R370 Gm24231-201ENSMUST00000104315 133 ntBASIC13.98□□□□□ -0.17
Ushbp1Q8R370 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC13.98□□□□□ -0.17
Ushbp1Q8R370 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC13.98□□□□□ -0.17
Ushbp1Q8R370 Gm11964-201ENSMUST00000120982 444 ntBASIC13.98□□□□□ -0.17
Ushbp1Q8R370 Gm12715-201ENSMUST00000121430 1128 ntBASIC13.98□□□□□ -0.17
Ushbp1Q8R370 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC13.98□□□□□ -0.17
Ushbp1Q8R370 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC13.98□□□□□ -0.17
Ushbp1Q8R370 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC13.98□□□□□ -0.17
Ushbp1Q8R370 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Ushbp1Q8R370 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ushbp1Q8R370 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ushbp1Q8R370 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC13.98□□□□□ -0.17
Ushbp1Q8R370 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ushbp1Q8R370 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Ushbp1Q8R370 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ushbp1Q8R370 CT009757.3-201ENSMUST00000223367 2320 ntBASIC13.98□□□□□ -0.17
Ushbp1Q8R370 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Ushbp1Q8R370 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ushbp1Q8R370 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ushbp1Q8R370 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC13.98□□□□□ -0.17
Ushbp1Q8R370 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ushbp1Q8R370 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ushbp1Q8R370 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ushbp1Q8R370 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ushbp1Q8R370 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC13.98□□□□□ -0.17
Ushbp1Q8R370 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ushbp1Q8R370 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ushbp1Q8R370 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ushbp1Q8R370 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ushbp1Q8R370 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ushbp1Q8R370 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ushbp1Q8R370 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ushbp1Q8R370 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ushbp1Q8R370 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ushbp1Q8R370 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ushbp1Q8R370 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Ushbp1Q8R370 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Ushbp1Q8R370 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC13.97□□□□□ -0.17
Ushbp1Q8R370 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ushbp1Q8R370 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Ushbp1Q8R370 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ushbp1Q8R370 Gm2606-201ENSMUST00000100754 1002 ntBASIC13.97□□□□□ -0.17
Ushbp1Q8R370 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Ushbp1Q8R370 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ushbp1Q8R370 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ushbp1Q8R370 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC13.97□□□□□ -0.17
Ushbp1Q8R370 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ushbp1Q8R370 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Ushbp1Q8R370 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC13.97□□□□□ -0.17
Ushbp1Q8R370 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC13.97□□□□□ -0.17
Ushbp1Q8R370 Gm7293-201ENSMUST00000216682 1007 ntBASIC13.97□□□□□ -0.17
Ushbp1Q8R370 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ushbp1Q8R370 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ushbp1Q8R370 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ushbp1Q8R370 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Ushbp1Q8R370 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC13.97□□□□□ -0.17
Ushbp1Q8R370 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ushbp1Q8R370 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ushbp1Q8R370 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ushbp1Q8R370 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Ushbp1Q8R370 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ushbp1Q8R370 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ushbp1Q8R370 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ushbp1Q8R370 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ushbp1Q8R370 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ushbp1Q8R370 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Ushbp1Q8R370 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ushbp1Q8R370 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ushbp1Q8R370 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Ushbp1Q8R370 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC13.97□□□□□ -0.17
Ushbp1Q8R370 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ushbp1Q8R370 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ushbp1Q8R370 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Ushbp1Q8R370 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ushbp1Q8R370 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms