Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clip4Q8CI96 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Clip4Q8CI96 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Clip4Q8CI96 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.58□□□□□ -0.4
Clip4Q8CI96 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clip4Q8CI96 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clip4Q8CI96 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clip4Q8CI96 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clip4Q8CI96 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clip4Q8CI96 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.58□□□□□ -0.4
Clip4Q8CI96 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.58□□□□□ -0.4
Clip4Q8CI96 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clip4Q8CI96 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clip4Q8CI96 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Clip4Q8CI96 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clip4Q8CI96 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Clip4Q8CI96 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Clip4Q8CI96 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clip4Q8CI96 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clip4Q8CI96 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clip4Q8CI96 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Clip4Q8CI96 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clip4Q8CI96 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.57□□□□□ -0.4
Clip4Q8CI96 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clip4Q8CI96 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clip4Q8CI96 Gm22018-201ENSMUST00000104357 131 ntBASIC12.57□□□□□ -0.4
Clip4Q8CI96 Gm12363-201ENSMUST00000122250 668 ntBASIC12.57□□□□□ -0.4
Clip4Q8CI96 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC12.57□□□□□ -0.4
Clip4Q8CI96 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Clip4Q8CI96 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Clip4Q8CI96 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clip4Q8CI96 Gm17208-201ENSMUST00000168388 535 ntBASIC12.57□□□□□ -0.4
Clip4Q8CI96 Gm18054-201ENSMUST00000207539 555 ntBASIC12.57□□□□□ -0.4
Clip4Q8CI96 Gm45880-201ENSMUST00000213041 853 ntBASIC12.57□□□□□ -0.4
Clip4Q8CI96 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC12.57□□□□□ -0.4
Clip4Q8CI96 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.57□□□□□ -0.4
Clip4Q8CI96 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clip4Q8CI96 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clip4Q8CI96 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clip4Q8CI96 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clip4Q8CI96 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clip4Q8CI96 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clip4Q8CI96 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Clip4Q8CI96 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clip4Q8CI96 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Clip4Q8CI96 Gm43579-201ENSMUST00000202387 1307 ntBASIC12.57□□□□□ -0.4
Clip4Q8CI96 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clip4Q8CI96 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clip4Q8CI96 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clip4Q8CI96 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Clip4Q8CI96 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clip4Q8CI96 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Clip4Q8CI96 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clip4Q8CI96 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Clip4Q8CI96 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Clip4Q8CI96 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clip4Q8CI96 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Clip4Q8CI96 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clip4Q8CI96 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clip4Q8CI96 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clip4Q8CI96 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Clip4Q8CI96 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
Clip4Q8CI96 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clip4Q8CI96 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clip4Q8CI96 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clip4Q8CI96 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clip4Q8CI96 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Clip4Q8CI96 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clip4Q8CI96 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Clip4Q8CI96 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clip4Q8CI96 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clip4Q8CI96 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC12.56□□□□□ -0.4
Clip4Q8CI96 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.56□□□□□ -0.4
Clip4Q8CI96 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC12.56□□□□□ -0.4
Clip4Q8CI96 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC12.56□□□□□ -0.4
Clip4Q8CI96 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Clip4Q8CI96 Gm16379-201ENSMUST00000161469 348 ntBASIC12.56□□□□□ -0.4
Clip4Q8CI96 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Clip4Q8CI96 Gm8762-201ENSMUST00000193486 339 ntBASIC12.56□□□□□ -0.4
Clip4Q8CI96 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12.56□□□□□ -0.4
Clip4Q8CI96 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clip4Q8CI96 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Clip4Q8CI96 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.56□□□□□ -0.4
Clip4Q8CI96 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.56□□□□□ -0.4
Clip4Q8CI96 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
Clip4Q8CI96 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clip4Q8CI96 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clip4Q8CI96 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.56□□□□□ -0.4
Clip4Q8CI96 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Clip4Q8CI96 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clip4Q8CI96 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clip4Q8CI96 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clip4Q8CI96 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Clip4Q8CI96 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clip4Q8CI96 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Clip4Q8CI96 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clip4Q8CI96 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clip4Q8CI96 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clip4Q8CI96 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC12.56□□□□□ -0.4
Clip4Q8CI96 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms