Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Ccdc28bQ8CEG5 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc28bQ8CEG5 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc28bQ8CEG5 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc28bQ8CEG5 Gm15321-201ENSMUST00000121290 288 ntBASIC12.33□□□□□ -0.44
Ccdc28bQ8CEG5 Gm14719-201ENSMUST00000121891 340 ntBASIC12.33□□□□□ -0.44
Ccdc28bQ8CEG5 Gm28693-202ENSMUST00000190758 331 ntBASIC12.33□□□□□ -0.44
Ccdc28bQ8CEG5 Gm45195-201ENSMUST00000205597 1008 ntBASIC12.33□□□□□ -0.44
Ccdc28bQ8CEG5 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC12.33□□□□□ -0.44
Ccdc28bQ8CEG5 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc28bQ8CEG5 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc28bQ8CEG5 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc28bQ8CEG5 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc28bQ8CEG5 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.33□□□□□ -0.44
Ccdc28bQ8CEG5 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc28bQ8CEG5 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc28bQ8CEG5 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc28bQ8CEG5 Gm38292-201ENSMUST00000192646 3045 ntBASIC12.33□□□□□ -0.44
Ccdc28bQ8CEG5 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc28bQ8CEG5 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc28bQ8CEG5 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc28bQ8CEG5 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc28bQ8CEG5 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC12.33□□□□□ -0.44
Ccdc28bQ8CEG5 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.33□□□□□ -0.44
Ccdc28bQ8CEG5 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc28bQ8CEG5 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Ccdc28bQ8CEG5 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc28bQ8CEG5 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc28bQ8CEG5 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc28bQ8CEG5 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc28bQ8CEG5 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
Ccdc28bQ8CEG5 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Ccdc28bQ8CEG5 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc28bQ8CEG5 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
Ccdc28bQ8CEG5 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
Ccdc28bQ8CEG5 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc28bQ8CEG5 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc28bQ8CEG5 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc28bQ8CEG5 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc28bQ8CEG5 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc28bQ8CEG5 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc28bQ8CEG5 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC12.32□□□□□ -0.44
Ccdc28bQ8CEG5 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC12.32□□□□□ -0.44
Ccdc28bQ8CEG5 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC12.32□□□□□ -0.44
Ccdc28bQ8CEG5 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC12.32□□□□□ -0.44
Ccdc28bQ8CEG5 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.32□□□□□ -0.44
Ccdc28bQ8CEG5 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc28bQ8CEG5 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.32□□□□□ -0.44
Ccdc28bQ8CEG5 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc28bQ8CEG5 AC156560.2-201ENSMUST00000221232 264 ntBASIC12.32□□□□□ -0.44
Ccdc28bQ8CEG5 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc28bQ8CEG5 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Ccdc28bQ8CEG5 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc28bQ8CEG5 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc28bQ8CEG5 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc28bQ8CEG5 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC12.32□□□□□ -0.44
Ccdc28bQ8CEG5 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc28bQ8CEG5 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc28bQ8CEG5 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc28bQ8CEG5 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc28bQ8CEG5 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc28bQ8CEG5 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Ccdc28bQ8CEG5 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc28bQ8CEG5 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.32□□□□□ -0.44
Ccdc28bQ8CEG5 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC12.32□□□□□ -0.44
Ccdc28bQ8CEG5 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC12.32□□□□□ -0.44
Ccdc28bQ8CEG5 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc28bQ8CEG5 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc28bQ8CEG5 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc28bQ8CEG5 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc28bQ8CEG5 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc28bQ8CEG5 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Ccdc28bQ8CEG5 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc28bQ8CEG5 Gm43172-201ENSMUST00000202139 2137 ntBASIC12.31□□□□□ -0.44
Ccdc28bQ8CEG5 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc28bQ8CEG5 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc28bQ8CEG5 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc28bQ8CEG5 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc28bQ8CEG5 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc28bQ8CEG5 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc28bQ8CEG5 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc28bQ8CEG5 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Ccdc28bQ8CEG5 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Ccdc28bQ8CEG5 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
Ccdc28bQ8CEG5 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc28bQ8CEG5 Ldha-ps-201ENSMUST00000119390 995 ntBASIC12.31□□□□□ -0.44
Ccdc28bQ8CEG5 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.31□□□□□ -0.44
Ccdc28bQ8CEG5 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc28bQ8CEG5 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc28bQ8CEG5 Mir8102-201ENSMUST00000184148 139 ntBASIC12.31□□□□□ -0.44
Ccdc28bQ8CEG5 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC12.31□□□□□ -0.44
Ccdc28bQ8CEG5 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12.31□□□□□ -0.44
Ccdc28bQ8CEG5 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc28bQ8CEG5 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc28bQ8CEG5 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC12.31□□□□□ -0.44
Ccdc28bQ8CEG5 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc28bQ8CEG5 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC12.31□□□□□ -0.44
Ccdc28bQ8CEG5 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc28bQ8CEG5 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc28bQ8CEG5 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms