Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.34□□□□□ -0.43
Lrif1Q8CDD9 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lrif1Q8CDD9 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Lrif1Q8CDD9 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Lrif1Q8CDD9 AC126257.2-201ENSMUST00000215507 2300 ntBASIC12.34□□□□□ -0.43
Lrif1Q8CDD9 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Lrif1Q8CDD9 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Lrif1Q8CDD9 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lrif1Q8CDD9 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lrif1Q8CDD9 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lrif1Q8CDD9 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lrif1Q8CDD9 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lrif1Q8CDD9 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lrif1Q8CDD9 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lrif1Q8CDD9 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lrif1Q8CDD9 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Lrif1Q8CDD9 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC12.33□□□□□ -0.43
Lrif1Q8CDD9 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.43
Lrif1Q8CDD9 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lrif1Q8CDD9 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lrif1Q8CDD9 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lrif1Q8CDD9 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.33□□□□□ -0.44
Lrif1Q8CDD9 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Lrif1Q8CDD9 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Lrif1Q8CDD9 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Lrif1Q8CDD9 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Lrif1Q8CDD9 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Lrif1Q8CDD9 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lrif1Q8CDD9 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Lrif1Q8CDD9 Gm5303-201ENSMUST00000117943 1252 ntBASIC12.33□□□□□ -0.44
Lrif1Q8CDD9 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC12.33□□□□□ -0.44
Lrif1Q8CDD9 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.33□□□□□ -0.44
Lrif1Q8CDD9 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Lrif1Q8CDD9 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Lrif1Q8CDD9 Gm7067-201ENSMUST00000207698 1249 ntBASIC12.33□□□□□ -0.44
Lrif1Q8CDD9 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
Lrif1Q8CDD9 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC12.33□□□□□ -0.44
Lrif1Q8CDD9 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.33□□□□□ -0.44
Lrif1Q8CDD9 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lrif1Q8CDD9 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lrif1Q8CDD9 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.33□□□□□ -0.44
Lrif1Q8CDD9 Gm26315-201ENSMUST00000083890 321 ntBASIC12.33□□□□□ -0.44
Lrif1Q8CDD9 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lrif1Q8CDD9 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.33□□□□□ -0.44
Lrif1Q8CDD9 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Lrif1Q8CDD9 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lrif1Q8CDD9 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lrif1Q8CDD9 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lrif1Q8CDD9 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lrif1Q8CDD9 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Lrif1Q8CDD9 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lrif1Q8CDD9 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lrif1Q8CDD9 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lrif1Q8CDD9 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lrif1Q8CDD9 Gm2238-201ENSMUST00000192074 3669 ntBASIC12.33□□□□□ -0.44
Lrif1Q8CDD9 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lrif1Q8CDD9 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lrif1Q8CDD9 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC12.33□□□□□ -0.44
Lrif1Q8CDD9 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Lrif1Q8CDD9 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Lrif1Q8CDD9 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Lrif1Q8CDD9 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lrif1Q8CDD9 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lrif1Q8CDD9 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lrif1Q8CDD9 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lrif1Q8CDD9 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lrif1Q8CDD9 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Lrif1Q8CDD9 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lrif1Q8CDD9 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lrif1Q8CDD9 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lrif1Q8CDD9 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lrif1Q8CDD9 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.32□□□□□ -0.44
Lrif1Q8CDD9 Gm43075-201ENSMUST00000198613 3905 ntBASIC12.32□□□□□ -0.44
Lrif1Q8CDD9 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lrif1Q8CDD9 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lrif1Q8CDD9 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Lrif1Q8CDD9 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Lrif1Q8CDD9 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.32□□□□□ -0.44
Lrif1Q8CDD9 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC12.32□□□□□ -0.44
Lrif1Q8CDD9 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Lrif1Q8CDD9 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC12.32□□□□□ -0.44
Lrif1Q8CDD9 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
Lrif1Q8CDD9 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC12.32□□□□□ -0.44
Lrif1Q8CDD9 Gm38230-201ENSMUST00000193572 1159 ntBASIC12.32□□□□□ -0.44
Lrif1Q8CDD9 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Lrif1Q8CDD9 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.32□□□□□ -0.44
Lrif1Q8CDD9 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12.32□□□□□ -0.44
Lrif1Q8CDD9 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Lrif1Q8CDD9 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lrif1Q8CDD9 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lrif1Q8CDD9 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lrif1Q8CDD9 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lrif1Q8CDD9 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lrif1Q8CDD9 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lrif1Q8CDD9 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Lrif1Q8CDD9 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lrif1Q8CDD9 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lrif1Q8CDD9 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lrif1Q8CDD9 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lrif1Q8CDD9 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms