Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sh3rf2Q8BZT2 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Sh3rf2Q8BZT2 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sh3rf2Q8BZT2 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sh3rf2Q8BZT2 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sh3rf2Q8BZT2 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sh3rf2Q8BZT2 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sh3rf2Q8BZT2 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sh3rf2Q8BZT2 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
Sh3rf2Q8BZT2 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sh3rf2Q8BZT2 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC12.64□□□□□ -0.39
Sh3rf2Q8BZT2 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sh3rf2Q8BZT2 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sh3rf2Q8BZT2 Gm7003-201ENSMUST00000195089 312 ntBASIC12.64□□□□□ -0.39
Sh3rf2Q8BZT2 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC12.64□□□□□ -0.39
Sh3rf2Q8BZT2 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC12.64□□□□□ -0.39
Sh3rf2Q8BZT2 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sh3rf2Q8BZT2 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC12.64□□□□□ -0.39
Sh3rf2Q8BZT2 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Sh3rf2Q8BZT2 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sh3rf2Q8BZT2 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sh3rf2Q8BZT2 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sh3rf2Q8BZT2 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sh3rf2Q8BZT2 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sh3rf2Q8BZT2 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sh3rf2Q8BZT2 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sh3rf2Q8BZT2 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.64□□□□□ -0.39
Sh3rf2Q8BZT2 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sh3rf2Q8BZT2 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sh3rf2Q8BZT2 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sh3rf2Q8BZT2 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sh3rf2Q8BZT2 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sh3rf2Q8BZT2 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sh3rf2Q8BZT2 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
Sh3rf2Q8BZT2 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sh3rf2Q8BZT2 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sh3rf2Q8BZT2 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sh3rf2Q8BZT2 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sh3rf2Q8BZT2 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sh3rf2Q8BZT2 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.63□□□□□ -0.39
Sh3rf2Q8BZT2 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.63□□□□□ -0.39
Sh3rf2Q8BZT2 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sh3rf2Q8BZT2 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sh3rf2Q8BZT2 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sh3rf2Q8BZT2 Gm12286-201ENSMUST00000119246 1002 ntBASIC12.63□□□□□ -0.39
Sh3rf2Q8BZT2 Gm9083-201ENSMUST00000120423 819 ntBASIC12.63□□□□□ -0.39
Sh3rf2Q8BZT2 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sh3rf2Q8BZT2 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Sh3rf2Q8BZT2 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sh3rf2Q8BZT2 B9d1os-201ENSMUST00000137010 674 ntBASIC12.63□□□□□ -0.39
Sh3rf2Q8BZT2 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.63□□□□□ -0.39
Sh3rf2Q8BZT2 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sh3rf2Q8BZT2 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Sh3rf2Q8BZT2 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sh3rf2Q8BZT2 Gm44958-201ENSMUST00000203734 736 ntBASIC12.63□□□□□ -0.39
Sh3rf2Q8BZT2 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Sh3rf2Q8BZT2 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sh3rf2Q8BZT2 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sh3rf2Q8BZT2 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sh3rf2Q8BZT2 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sh3rf2Q8BZT2 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sh3rf2Q8BZT2 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sh3rf2Q8BZT2 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sh3rf2Q8BZT2 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
Sh3rf2Q8BZT2 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sh3rf2Q8BZT2 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC12.63□□□□□ -0.39
Sh3rf2Q8BZT2 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sh3rf2Q8BZT2 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sh3rf2Q8BZT2 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Sh3rf2Q8BZT2 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.63□□□□□ -0.39
Sh3rf2Q8BZT2 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sh3rf2Q8BZT2 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sh3rf2Q8BZT2 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sh3rf2Q8BZT2 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sh3rf2Q8BZT2 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sh3rf2Q8BZT2 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sh3rf2Q8BZT2 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sh3rf2Q8BZT2 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC12.62□□□□□ -0.39
Sh3rf2Q8BZT2 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sh3rf2Q8BZT2 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC12.62□□□□□ -0.39
Sh3rf2Q8BZT2 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.62□□□□□ -0.39
Sh3rf2Q8BZT2 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC12.62□□□□□ -0.39
Sh3rf2Q8BZT2 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.62□□□□□ -0.39
Sh3rf2Q8BZT2 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sh3rf2Q8BZT2 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sh3rf2Q8BZT2 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sh3rf2Q8BZT2 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Sh3rf2Q8BZT2 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sh3rf2Q8BZT2 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sh3rf2Q8BZT2 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sh3rf2Q8BZT2 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sh3rf2Q8BZT2 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sh3rf2Q8BZT2 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.62□□□□□ -0.39
Sh3rf2Q8BZT2 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sh3rf2Q8BZT2 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sh3rf2Q8BZT2 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.62□□□□□ -0.39
Sh3rf2Q8BZT2 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sh3rf2Q8BZT2 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sh3rf2Q8BZT2 Gm24934-201ENSMUST00000103764 111 ntBASIC12.62□□□□□ -0.39
Sh3rf2Q8BZT2 Gm23200-201ENSMUST00000104379 132 ntBASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms