Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Chd9Q8BYH8 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Chd9Q8BYH8 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Chd9Q8BYH8 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Chd9Q8BYH8 Gm14639-201ENSMUST00000120850 866 ntBASIC9.69□□□□□ -0.86
Chd9Q8BYH8 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC9.69□□□□□ -0.86
Chd9Q8BYH8 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC9.69□□□□□ -0.86
Chd9Q8BYH8 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC9.69□□□□□ -0.86
Chd9Q8BYH8 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Chd9Q8BYH8 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Chd9Q8BYH8 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC9.69□□□□□ -0.86
Chd9Q8BYH8 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Chd9Q8BYH8 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Chd9Q8BYH8 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Chd9Q8BYH8 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Chd9Q8BYH8 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
Chd9Q8BYH8 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Chd9Q8BYH8 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Chd9Q8BYH8 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Chd9Q8BYH8 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Chd9Q8BYH8 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Chd9Q8BYH8 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Chd9Q8BYH8 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Chd9Q8BYH8 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Chd9Q8BYH8 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Chd9Q8BYH8 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Chd9Q8BYH8 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Chd9Q8BYH8 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Chd9Q8BYH8 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Chd9Q8BYH8 Crygf-202ENSMUST00000114027 594 ntTSL 2 BASIC9.69□□□□□ -0.86
Chd9Q8BYH8 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Chd9Q8BYH8 Gm14921-201ENSMUST00000118643 908 ntBASIC9.69□□□□□ -0.86
Chd9Q8BYH8 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC9.69□□□□□ -0.86
Chd9Q8BYH8 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC9.69□□□□□ -0.86
Chd9Q8BYH8 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC9.69□□□□□ -0.86
Chd9Q8BYH8 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC9.69□□□□□ -0.86
Chd9Q8BYH8 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Chd9Q8BYH8 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Chd9Q8BYH8 Gm7069-201ENSMUST00000182418 1008 ntBASIC9.69□□□□□ -0.86
Chd9Q8BYH8 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC9.69□□□□□ -0.86
Chd9Q8BYH8 Gm43912-201ENSMUST00000204352 538 ntBASIC9.69□□□□□ -0.86
Chd9Q8BYH8 Pigx-212ENSMUST00000215073 765 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Chd9Q8BYH8 Hpf1-201ENSMUST00000037190 1191 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Chd9Q8BYH8 Elob-201ENSMUST00000069579 508 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Chd9Q8BYH8 Larp1b-204ENSMUST00000099121 1030 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Chd9Q8BYH8 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Chd9Q8BYH8 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Chd9Q8BYH8 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Chd9Q8BYH8 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Chd9Q8BYH8 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Chd9Q8BYH8 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Chd9Q8BYH8 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Chd9Q8BYH8 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Chd9Q8BYH8 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Chd9Q8BYH8 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC9.69□□□□□ -0.86
Chd9Q8BYH8 Tnfrsf9-203ENSMUST00000105671 1278 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Chd9Q8BYH8 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Chd9Q8BYH8 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC9.69□□□□□ -0.86
Chd9Q8BYH8 Gm12857-201ENSMUST00000117678 592 ntBASIC9.69□□□□□ -0.86
Chd9Q8BYH8 Glrx2-206ENSMUST00000145969 924 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Chd9Q8BYH8 Gm28651-201ENSMUST00000185335 644 ntTSL 3 BASIC9.69□□□□□ -0.86
Chd9Q8BYH8 C230062I16Rik-203ENSMUST00000208015 648 ntTSL 3 BASIC9.69□□□□□ -0.86
Chd9Q8BYH8 Mrpl23-207ENSMUST00000210803 590 ntTSL 3 BASIC9.69□□□□□ -0.86
Chd9Q8BYH8 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Chd9Q8BYH8 Tnfrsf9-202ENSMUST00000060901 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Chd9Q8BYH8 Gm44152-201ENSMUST00000205007 1691 ntBASIC9.68□□□□□ -0.86
Chd9Q8BYH8 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Chd9Q8BYH8 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Chd9Q8BYH8 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Chd9Q8BYH8 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Chd9Q8BYH8 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Chd9Q8BYH8 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Chd9Q8BYH8 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Chd9Q8BYH8 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Chd9Q8BYH8 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC9.68□□□□□ -0.86
Chd9Q8BYH8 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Chd9Q8BYH8 Gm6641-201ENSMUST00000196100 1315 ntBASIC9.68□□□□□ -0.86
Chd9Q8BYH8 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Chd9Q8BYH8 Gm44891-201ENSMUST00000208817 2223 ntBASIC9.68□□□□□ -0.86
Chd9Q8BYH8 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Chd9Q8BYH8 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Chd9Q8BYH8 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC9.68□□□□□ -0.86
Chd9Q8BYH8 Tprkb-204ENSMUST00000113752 749 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Chd9Q8BYH8 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Chd9Q8BYH8 Cd63-ps-202ENSMUST00000154992 717 ntBASIC9.68□□□□□ -0.86
Chd9Q8BYH8 Gm23045-201ENSMUST00000175041 96 ntBASIC9.68□□□□□ -0.86
Chd9Q8BYH8 Gm39404-201ENSMUST00000216350 313 ntBASIC9.68□□□□□ -0.86
Chd9Q8BYH8 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Chd9Q8BYH8 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC9.68□□□□□ -0.86
Chd9Q8BYH8 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Chd9Q8BYH8 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Chd9Q8BYH8 Uqcc3-201ENSMUST00000096253 829 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Chd9Q8BYH8 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Chd9Q8BYH8 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Chd9Q8BYH8 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Chd9Q8BYH8 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Chd9Q8BYH8 AC154725.1-201ENSMUST00000224826 1961 ntBASIC9.68□□□□□ -0.86
Chd9Q8BYH8 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Chd9Q8BYH8 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Chd9Q8BYH8 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms