Protein–RNA interactions for Protein: Q8BVF4

Ccdc30, Coiled-coil domain-containing protein 30, mousemouse

Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc30Q8BVF4 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ccdc30Q8BVF4 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ccdc30Q8BVF4 Matn2-203ENSMUST00000226766 3252 ntBASIC16.07■□□□□ 0.16
Ccdc30Q8BVF4 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ccdc30Q8BVF4 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ccdc30Q8BVF4 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ccdc30Q8BVF4 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc30Q8BVF4 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc30Q8BVF4 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
Ccdc30Q8BVF4 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc30Q8BVF4 Gm14132-201ENSMUST00000117188 1719 ntBASIC16.06■□□□□ 0.16
Ccdc30Q8BVF4 AC122197.2-201ENSMUST00000219196 1635 ntBASIC16.06■□□□□ 0.16
Ccdc30Q8BVF4 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Ccdc30Q8BVF4 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Ccdc30Q8BVF4 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Ccdc30Q8BVF4 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc30Q8BVF4 Gm37472-201ENSMUST00000192342 4052 ntBASIC16.06■□□□□ 0.16
Ccdc30Q8BVF4 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc30Q8BVF4 Gm2606-201ENSMUST00000100754 1002 ntBASIC16.06■□□□□ 0.16
Ccdc30Q8BVF4 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc30Q8BVF4 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Ccdc30Q8BVF4 Gm15370-201ENSMUST00000117158 253 ntBASIC16.06■□□□□ 0.16
Ccdc30Q8BVF4 Gm12286-201ENSMUST00000119246 1002 ntBASIC16.06■□□□□ 0.16
Ccdc30Q8BVF4 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC16.06■□□□□ 0.16
Ccdc30Q8BVF4 Gm24845-201ENSMUST00000158034 109 ntBASIC16.06■□□□□ 0.16
Ccdc30Q8BVF4 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC16.06■□□□□ 0.16
Ccdc30Q8BVF4 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC16.06■□□□□ 0.16
Ccdc30Q8BVF4 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
Ccdc30Q8BVF4 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc30Q8BVF4 Gm27023-201ENSMUST00000182372 285 ntBASIC16.06■□□□□ 0.16
Ccdc30Q8BVF4 Gm27390-201ENSMUST00000184516 176 ntBASIC16.06■□□□□ 0.16
Ccdc30Q8BVF4 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
Ccdc30Q8BVF4 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC16.06■□□□□ 0.16
Ccdc30Q8BVF4 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC16.06■□□□□ 0.16
Ccdc30Q8BVF4 Gm6013-201ENSMUST00000212264 699 ntBASIC16.06■□□□□ 0.16
Ccdc30Q8BVF4 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc30Q8BVF4 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc30Q8BVF4 Nupl1-206ENSMUST00000225111 2936 ntBASIC16.06■□□□□ 0.16
Ccdc30Q8BVF4 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc30Q8BVF4 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc30Q8BVF4 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC16.06■□□□□ 0.16
Ccdc30Q8BVF4 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc30Q8BVF4 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Ccdc30Q8BVF4 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc30Q8BVF4 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc30Q8BVF4 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc30Q8BVF4 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Ccdc30Q8BVF4 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc30Q8BVF4 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc30Q8BVF4 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc30Q8BVF4 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc30Q8BVF4 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc30Q8BVF4 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc30Q8BVF4 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc30Q8BVF4 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc30Q8BVF4 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc30Q8BVF4 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc30Q8BVF4 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Ccdc30Q8BVF4 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Ccdc30Q8BVF4 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Ccdc30Q8BVF4 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc30Q8BVF4 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc30Q8BVF4 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC16.05■□□□□ 0.16
Ccdc30Q8BVF4 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc30Q8BVF4 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Ccdc30Q8BVF4 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC16.05■□□□□ 0.16
Ccdc30Q8BVF4 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Ccdc30Q8BVF4 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC16.05■□□□□ 0.16
Ccdc30Q8BVF4 AC153974.2-201ENSMUST00000218577 1025 ntBASIC16.05■□□□□ 0.16
Ccdc30Q8BVF4 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc30Q8BVF4 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc30Q8BVF4 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc30Q8BVF4 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc30Q8BVF4 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
Ccdc30Q8BVF4 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc30Q8BVF4 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc30Q8BVF4 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc30Q8BVF4 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc30Q8BVF4 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc30Q8BVF4 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc30Q8BVF4 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc30Q8BVF4 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC16.04■□□□□ 0.16
Ccdc30Q8BVF4 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
Ccdc30Q8BVF4 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc30Q8BVF4 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc30Q8BVF4 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC16.04■□□□□ 0.16
Ccdc30Q8BVF4 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc30Q8BVF4 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc30Q8BVF4 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc30Q8BVF4 Gm5940-201ENSMUST00000117582 1068 ntBASIC16.04■□□□□ 0.16
Ccdc30Q8BVF4 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc30Q8BVF4 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Ccdc30Q8BVF4 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc30Q8BVF4 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC16.04■□□□□ 0.16
Ccdc30Q8BVF4 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc30Q8BVF4 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
Ccdc30Q8BVF4 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC16.04■□□□□ 0.16
Ccdc30Q8BVF4 Gm7399-201ENSMUST00000032395 858 ntBASIC16.04■□□□□ 0.16
Ccdc30Q8BVF4 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Ccdc30Q8BVF4 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms