Protein–RNA interactions for Protein: Q8BUV6

Lsm11, U7 snRNA-associated Sm-like protein LSm11, mousemouse

Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm11Q8BUV6 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Lsm11Q8BUV6 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Lsm11Q8BUV6 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Lsm11Q8BUV6 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Lsm11Q8BUV6 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Lsm11Q8BUV6 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Lsm11Q8BUV6 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Lsm11Q8BUV6 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Lsm11Q8BUV6 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC10.75□□□□□ -0.69
Lsm11Q8BUV6 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Lsm11Q8BUV6 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Lsm11Q8BUV6 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC10.75□□□□□ -0.69
Lsm11Q8BUV6 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Lsm11Q8BUV6 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Lsm11Q8BUV6 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Lsm11Q8BUV6 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Lsm11Q8BUV6 Gm43174-201ENSMUST00000195914 2445 ntBASIC10.75□□□□□ -0.69
Lsm11Q8BUV6 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Lsm11Q8BUV6 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Lsm11Q8BUV6 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Lsm11Q8BUV6 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Lsm11Q8BUV6 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Lsm11Q8BUV6 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Lsm11Q8BUV6 E130114P18Rik-201ENSMUST00000107067 1092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Lsm11Q8BUV6 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC10.75□□□□□ -0.69
Lsm11Q8BUV6 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Lsm11Q8BUV6 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Lsm11Q8BUV6 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Lsm11Q8BUV6 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Lsm11Q8BUV6 Gm5687-201ENSMUST00000118252 640 ntBASIC10.75□□□□□ -0.69
Lsm11Q8BUV6 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC10.75□□□□□ -0.69
Lsm11Q8BUV6 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC10.75□□□□□ -0.69
Lsm11Q8BUV6 Gm19184-201ENSMUST00000196798 928 ntBASIC10.75□□□□□ -0.69
Lsm11Q8BUV6 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC10.75□□□□□ -0.69
Lsm11Q8BUV6 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC10.75□□□□□ -0.69
Lsm11Q8BUV6 Gm45525-201ENSMUST00000210800 389 ntBASIC10.75□□□□□ -0.69
Lsm11Q8BUV6 Gm36287-201ENSMUST00000223481 796 ntTSL 5 BASIC10.75□□□□□ -0.69
Lsm11Q8BUV6 CT030194.1-201ENSMUST00000225507 532 ntBASIC10.75□□□□□ -0.69
Lsm11Q8BUV6 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Lsm11Q8BUV6 Olfr870-201ENSMUST00000086476 936 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Lsm11Q8BUV6 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Lsm11Q8BUV6 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Lsm11Q8BUV6 Gm42943-201ENSMUST00000199676 3242 ntBASIC10.75□□□□□ -0.69
Lsm11Q8BUV6 Gm43727-201ENSMUST00000198021 2647 ntBASIC10.75□□□□□ -0.69
Lsm11Q8BUV6 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Lsm11Q8BUV6 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Lsm11Q8BUV6 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Lsm11Q8BUV6 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Lsm11Q8BUV6 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Lsm11Q8BUV6 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Lsm11Q8BUV6 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC10.75□□□□□ -0.69
Lsm11Q8BUV6 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Lsm11Q8BUV6 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Lsm11Q8BUV6 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Lsm11Q8BUV6 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Lsm11Q8BUV6 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Lsm11Q8BUV6 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Lsm11Q8BUV6 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Lsm11Q8BUV6 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC10.75□□□□□ -0.69
Lsm11Q8BUV6 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Lsm11Q8BUV6 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Lsm11Q8BUV6 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Lsm11Q8BUV6 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Lsm11Q8BUV6 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Lsm11Q8BUV6 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC10.74□□□□□ -0.69
Lsm11Q8BUV6 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Lsm11Q8BUV6 CT009713.10-201ENSMUST00000225013 1986 ntBASIC10.74□□□□□ -0.69
Lsm11Q8BUV6 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Lsm11Q8BUV6 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Lsm11Q8BUV6 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Lsm11Q8BUV6 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Lsm11Q8BUV6 Gm40377-201ENSMUST00000204604 2015 ntBASIC10.74□□□□□ -0.69
Lsm11Q8BUV6 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Lsm11Q8BUV6 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Lsm11Q8BUV6 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Lsm11Q8BUV6 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Lsm11Q8BUV6 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC10.74□□□□□ -0.69
Lsm11Q8BUV6 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Lsm11Q8BUV6 Dmrtc1b-202ENSMUST00000113609 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Lsm11Q8BUV6 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Lsm11Q8BUV6 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC10.74□□□□□ -0.69
Lsm11Q8BUV6 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Lsm11Q8BUV6 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Lsm11Q8BUV6 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC10.74□□□□□ -0.69
Lsm11Q8BUV6 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Lsm11Q8BUV6 Gm3099-202ENSMUST00000178274 618 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Lsm11Q8BUV6 Gm27390-201ENSMUST00000184516 176 ntBASIC10.74□□□□□ -0.69
Lsm11Q8BUV6 Gm42565-201ENSMUST00000197839 572 ntTSL 5 BASIC10.74□□□□□ -0.69
Lsm11Q8BUV6 Il6-204ENSMUST00000199765 963 ntAPPRIS ALT2 TSL 2 BASIC10.74□□□□□ -0.69
Lsm11Q8BUV6 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC10.74□□□□□ -0.69
Lsm11Q8BUV6 AC118750.1-201ENSMUST00000214163 675 ntTSL 3 BASIC10.74□□□□□ -0.69
Lsm11Q8BUV6 AC165256.1-201ENSMUST00000216687 670 ntTSL 2 BASIC10.74□□□□□ -0.69
Lsm11Q8BUV6 AC132384.10-201ENSMUST00000217862 1204 ntBASIC10.74□□□□□ -0.69
Lsm11Q8BUV6 4930447F04Rik-201ENSMUST00000033525 703 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Lsm11Q8BUV6 Mir339-201ENSMUST00000083659 96 ntBASIC10.74□□□□□ -0.69
Lsm11Q8BUV6 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Lsm11Q8BUV6 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC10.74□□□□□ -0.69
Lsm11Q8BUV6 AC158355.1-201ENSMUST00000215895 1705 ntBASIC10.74□□□□□ -0.69
Lsm11Q8BUV6 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Lsm11Q8BUV6 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC10.74□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 76.9 ms