Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Slc5a7Q8BGY9 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
Slc5a7Q8BGY9 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Slc5a7Q8BGY9 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Slc5a7Q8BGY9 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Slc5a7Q8BGY9 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Slc5a7Q8BGY9 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC10.9□□□□□ -0.66
Slc5a7Q8BGY9 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
Slc5a7Q8BGY9 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Slc5a7Q8BGY9 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC10.9□□□□□ -0.66
Slc5a7Q8BGY9 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC10.9□□□□□ -0.66
Slc5a7Q8BGY9 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Slc5a7Q8BGY9 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Slc5a7Q8BGY9 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC10.9□□□□□ -0.66
Slc5a7Q8BGY9 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Slc5a7Q8BGY9 Gm27430-201ENSMUST00000184585 107 ntBASIC10.9□□□□□ -0.66
Slc5a7Q8BGY9 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC10.9□□□□□ -0.66
Slc5a7Q8BGY9 Gm44333-201ENSMUST00000197168 107 ntBASIC10.9□□□□□ -0.66
Slc5a7Q8BGY9 Gm44064-201ENSMUST00000204964 1087 ntBASIC10.9□□□□□ -0.66
Slc5a7Q8BGY9 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC10.9□□□□□ -0.66
Slc5a7Q8BGY9 AC238811.1-201ENSMUST00000225302 441 ntBASIC10.9□□□□□ -0.66
Slc5a7Q8BGY9 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Slc5a7Q8BGY9 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC10.9□□□□□ -0.66
Slc5a7Q8BGY9 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Slc5a7Q8BGY9 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Slc5a7Q8BGY9 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Slc5a7Q8BGY9 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Slc5a7Q8BGY9 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Slc5a7Q8BGY9 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Slc5a7Q8BGY9 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Slc5a7Q8BGY9 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC10.9□□□□□ -0.66
Slc5a7Q8BGY9 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Slc5a7Q8BGY9 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Slc5a7Q8BGY9 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Slc5a7Q8BGY9 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Slc5a7Q8BGY9 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Slc5a7Q8BGY9 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC10.9□□□□□ -0.66
Slc5a7Q8BGY9 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Slc5a7Q8BGY9 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Slc5a7Q8BGY9 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC10.9□□□□□ -0.66
Slc5a7Q8BGY9 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Slc5a7Q8BGY9 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Slc5a7Q8BGY9 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Slc5a7Q8BGY9 Gm19692-201ENSMUST00000203856 2084 ntBASIC10.89□□□□□ -0.67
Slc5a7Q8BGY9 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Slc5a7Q8BGY9 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
Slc5a7Q8BGY9 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Slc5a7Q8BGY9 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Slc5a7Q8BGY9 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Slc5a7Q8BGY9 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Slc5a7Q8BGY9 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Slc5a7Q8BGY9 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Slc5a7Q8BGY9 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Slc5a7Q8BGY9 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Slc5a7Q8BGY9 CT009713.10-201ENSMUST00000225013 1986 ntBASIC10.89□□□□□ -0.67
Slc5a7Q8BGY9 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Slc5a7Q8BGY9 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Slc5a7Q8BGY9 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Slc5a7Q8BGY9 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC10.89□□□□□ -0.67
Slc5a7Q8BGY9 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC10.89□□□□□ -0.67
Slc5a7Q8BGY9 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Slc5a7Q8BGY9 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Slc5a7Q8BGY9 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Slc5a7Q8BGY9 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC10.89□□□□□ -0.67
Slc5a7Q8BGY9 Gm17837-201ENSMUST00000186435 985 ntBASIC10.89□□□□□ -0.67
Slc5a7Q8BGY9 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC10.89□□□□□ -0.67
Slc5a7Q8BGY9 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC10.89□□□□□ -0.67
Slc5a7Q8BGY9 AC155258.1-201ENSMUST00000219303 253 ntBASIC10.89□□□□□ -0.67
Slc5a7Q8BGY9 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Slc5a7Q8BGY9 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Slc5a7Q8BGY9 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Slc5a7Q8BGY9 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Slc5a7Q8BGY9 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Slc5a7Q8BGY9 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
Slc5a7Q8BGY9 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC10.89□□□□□ -0.67
Slc5a7Q8BGY9 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Slc5a7Q8BGY9 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Slc5a7Q8BGY9 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Slc5a7Q8BGY9 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC10.89□□□□□ -0.67
Slc5a7Q8BGY9 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Slc5a7Q8BGY9 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC10.89□□□□□ -0.67
Slc5a7Q8BGY9 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Slc5a7Q8BGY9 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Slc5a7Q8BGY9 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC10.89□□□□□ -0.67
Slc5a7Q8BGY9 Gm6211-201ENSMUST00000147973 4275 ntBASIC10.89□□□□□ -0.67
Slc5a7Q8BGY9 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Slc5a7Q8BGY9 Gm36987-201ENSMUST00000194704 2979 ntBASIC10.89□□□□□ -0.67
Slc5a7Q8BGY9 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Slc5a7Q8BGY9 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Slc5a7Q8BGY9 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Slc5a7Q8BGY9 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Slc5a7Q8BGY9 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Slc5a7Q8BGY9 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Slc5a7Q8BGY9 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Slc5a7Q8BGY9 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Slc5a7Q8BGY9 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Slc5a7Q8BGY9 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Slc5a7Q8BGY9 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC10.88□□□□□ -0.67
Slc5a7Q8BGY9 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Slc5a7Q8BGY9 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms