Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh8Q7TSK3 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
Pcdh8Q7TSK3 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh8Q7TSK3 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh8Q7TSK3 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh8Q7TSK3 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh8Q7TSK3 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh8Q7TSK3 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh8Q7TSK3 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Pcdh8Q7TSK3 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
Pcdh8Q7TSK3 Gm2606-201ENSMUST00000100754 1002 ntBASIC12.33□□□□□ -0.44
Pcdh8Q7TSK3 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh8Q7TSK3 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh8Q7TSK3 Gm13813-201ENSMUST00000120998 787 ntBASIC12.33□□□□□ -0.44
Pcdh8Q7TSK3 Gm14017-201ENSMUST00000121934 386 ntBASIC12.33□□□□□ -0.44
Pcdh8Q7TSK3 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.33□□□□□ -0.44
Pcdh8Q7TSK3 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh8Q7TSK3 Mir3102-201ENSMUST00000175555 104 ntBASIC12.33□□□□□ -0.44
Pcdh8Q7TSK3 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC12.33□□□□□ -0.44
Pcdh8Q7TSK3 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC12.33□□□□□ -0.44
Pcdh8Q7TSK3 Gm7293-201ENSMUST00000216682 1007 ntBASIC12.33□□□□□ -0.44
Pcdh8Q7TSK3 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC12.33□□□□□ -0.44
Pcdh8Q7TSK3 AC113031.8-201ENSMUST00000227856 631 ntBASIC12.33□□□□□ -0.44
Pcdh8Q7TSK3 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh8Q7TSK3 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC12.33□□□□□ -0.44
Pcdh8Q7TSK3 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh8Q7TSK3 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh8Q7TSK3 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh8Q7TSK3 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.33□□□□□ -0.44
Pcdh8Q7TSK3 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh8Q7TSK3 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12.33□□□□□ -0.44
Pcdh8Q7TSK3 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh8Q7TSK3 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Pcdh8Q7TSK3 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.33□□□□□ -0.44
Pcdh8Q7TSK3 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Pcdh8Q7TSK3 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.33□□□□□ -0.44
Pcdh8Q7TSK3 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh8Q7TSK3 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdh8Q7TSK3 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh8Q7TSK3 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh8Q7TSK3 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh8Q7TSK3 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh8Q7TSK3 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh8Q7TSK3 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh8Q7TSK3 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Pcdh8Q7TSK3 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh8Q7TSK3 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Pcdh8Q7TSK3 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh8Q7TSK3 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Pcdh8Q7TSK3 Gm14130-201ENSMUST00000118417 987 ntBASIC12.32□□□□□ -0.44
Pcdh8Q7TSK3 Gm14109-201ENSMUST00000118814 309 ntBASIC12.32□□□□□ -0.44
Pcdh8Q7TSK3 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh8Q7TSK3 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh8Q7TSK3 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh8Q7TSK3 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.32□□□□□ -0.44
Pcdh8Q7TSK3 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC12.32□□□□□ -0.44
Pcdh8Q7TSK3 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh8Q7TSK3 Gm8018-201ENSMUST00000173536 789 ntBASIC12.32□□□□□ -0.44
Pcdh8Q7TSK3 Rn7s1-201ENSMUST00000174924 300 ntBASIC12.32□□□□□ -0.44
Pcdh8Q7TSK3 Rn7s2-201ENSMUST00000175032 300 ntBASIC12.32□□□□□ -0.44
Pcdh8Q7TSK3 Gm26461-201ENSMUST00000175064 290 ntBASIC12.32□□□□□ -0.44
Pcdh8Q7TSK3 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Pcdh8Q7TSK3 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh8Q7TSK3 Gm18212-201ENSMUST00000211678 889 ntBASIC12.32□□□□□ -0.44
Pcdh8Q7TSK3 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC12.32□□□□□ -0.44
Pcdh8Q7TSK3 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh8Q7TSK3 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh8Q7TSK3 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh8Q7TSK3 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh8Q7TSK3 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Pcdh8Q7TSK3 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh8Q7TSK3 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh8Q7TSK3 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh8Q7TSK3 Gm2673-201ENSMUST00000120958 1608 ntBASIC12.32□□□□□ -0.44
Pcdh8Q7TSK3 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh8Q7TSK3 AC113441.2-201ENSMUST00000221538 1468 ntBASIC12.32□□□□□ -0.44
Pcdh8Q7TSK3 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh8Q7TSK3 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh8Q7TSK3 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.32□□□□□ -0.44
Pcdh8Q7TSK3 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.32□□□□□ -0.44
Pcdh8Q7TSK3 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh8Q7TSK3 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh8Q7TSK3 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Pcdh8Q7TSK3 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh8Q7TSK3 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh8Q7TSK3 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Pcdh8Q7TSK3 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh8Q7TSK3 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Pcdh8Q7TSK3 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh8Q7TSK3 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh8Q7TSK3 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh8Q7TSK3 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Pcdh8Q7TSK3 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh8Q7TSK3 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh8Q7TSK3 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh8Q7TSK3 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Pcdh8Q7TSK3 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh8Q7TSK3 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
Pcdh8Q7TSK3 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh8Q7TSK3 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 73.1 ms