Protein–RNA interactions for Protein: Q6PIP5

Nudcd1, NudC domain-containing protein 1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd1Q6PIP5 Rmrp-201ENSMUST00000157463 271 ntBASIC12.6□□□□□ -0.39
Nudcd1Q6PIP5 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC12.6□□□□□ -0.39
Nudcd1Q6PIP5 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nudcd1Q6PIP5 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC12.6□□□□□ -0.39
Nudcd1Q6PIP5 Gm37466-201ENSMUST00000195692 652 ntBASIC12.6□□□□□ -0.39
Nudcd1Q6PIP5 Gm45186-201ENSMUST00000206874 478 ntBASIC12.6□□□□□ -0.39
Nudcd1Q6PIP5 Gm44967-201ENSMUST00000207047 631 ntBASIC12.6□□□□□ -0.39
Nudcd1Q6PIP5 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nudcd1Q6PIP5 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
Nudcd1Q6PIP5 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC12.6□□□□□ -0.39
Nudcd1Q6PIP5 AC161537.1-201ENSMUST00000226199 1015 ntBASIC12.6□□□□□ -0.39
Nudcd1Q6PIP5 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.6□□□□□ -0.39
Nudcd1Q6PIP5 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Nudcd1Q6PIP5 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.6□□□□□ -0.39
Nudcd1Q6PIP5 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nudcd1Q6PIP5 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nudcd1Q6PIP5 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nudcd1Q6PIP5 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nudcd1Q6PIP5 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Nudcd1Q6PIP5 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.6□□□□□ -0.39
Nudcd1Q6PIP5 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nudcd1Q6PIP5 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nudcd1Q6PIP5 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Nudcd1Q6PIP5 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nudcd1Q6PIP5 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.6□□□□□ -0.39
Nudcd1Q6PIP5 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nudcd1Q6PIP5 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.59□□□□□ -0.39
Nudcd1Q6PIP5 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nudcd1Q6PIP5 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Nudcd1Q6PIP5 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nudcd1Q6PIP5 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nudcd1Q6PIP5 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.59□□□□□ -0.39
Nudcd1Q6PIP5 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Nudcd1Q6PIP5 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nudcd1Q6PIP5 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nudcd1Q6PIP5 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nudcd1Q6PIP5 Gm14130-201ENSMUST00000118417 987 ntBASIC12.59□□□□□ -0.39
Nudcd1Q6PIP5 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Nudcd1Q6PIP5 Gm13570-201ENSMUST00000140763 309 ntBASIC12.59□□□□□ -0.39
Nudcd1Q6PIP5 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nudcd1Q6PIP5 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC12.59□□□□□ -0.39
Nudcd1Q6PIP5 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC12.59□□□□□ -0.39
Nudcd1Q6PIP5 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Nudcd1Q6PIP5 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC12.59□□□□□ -0.39
Nudcd1Q6PIP5 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC12.59□□□□□ -0.39
Nudcd1Q6PIP5 Gm5363-201ENSMUST00000211927 938 ntBASIC12.59□□□□□ -0.39
Nudcd1Q6PIP5 AC154222.2-201ENSMUST00000225848 607 ntBASIC12.59□□□□□ -0.39
Nudcd1Q6PIP5 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nudcd1Q6PIP5 Gm10076-201ENSMUST00000073238 384 ntBASIC12.59□□□□□ -0.39
Nudcd1Q6PIP5 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nudcd1Q6PIP5 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nudcd1Q6PIP5 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nudcd1Q6PIP5 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nudcd1Q6PIP5 AC123857.2-201ENSMUST00000225756 1582 ntBASIC12.59□□□□□ -0.39
Nudcd1Q6PIP5 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nudcd1Q6PIP5 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Nudcd1Q6PIP5 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nudcd1Q6PIP5 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nudcd1Q6PIP5 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
Nudcd1Q6PIP5 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.59□□□□□ -0.39
Nudcd1Q6PIP5 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
Nudcd1Q6PIP5 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Nudcd1Q6PIP5 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Nudcd1Q6PIP5 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.58□□□□□ -0.4
Nudcd1Q6PIP5 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nudcd1Q6PIP5 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nudcd1Q6PIP5 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nudcd1Q6PIP5 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Nudcd1Q6PIP5 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Nudcd1Q6PIP5 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nudcd1Q6PIP5 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nudcd1Q6PIP5 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Nudcd1Q6PIP5 Gm14832-201ENSMUST00000121289 322 ntBASIC12.58□□□□□ -0.4
Nudcd1Q6PIP5 Gm11597-201ENSMUST00000121423 964 ntBASIC12.58□□□□□ -0.4
Nudcd1Q6PIP5 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC12.58□□□□□ -0.4
Nudcd1Q6PIP5 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Nudcd1Q6PIP5 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.58□□□□□ -0.4
Nudcd1Q6PIP5 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Nudcd1Q6PIP5 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nudcd1Q6PIP5 Rn7s1-201ENSMUST00000174924 300 ntBASIC12.58□□□□□ -0.4
Nudcd1Q6PIP5 Rn7s2-201ENSMUST00000175032 300 ntBASIC12.58□□□□□ -0.4
Nudcd1Q6PIP5 Gm26461-201ENSMUST00000175064 290 ntBASIC12.58□□□□□ -0.4
Nudcd1Q6PIP5 Gm18212-201ENSMUST00000211678 889 ntBASIC12.58□□□□□ -0.4
Nudcd1Q6PIP5 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.58□□□□□ -0.4
Nudcd1Q6PIP5 CT030182.1-201ENSMUST00000225935 533 ntBASIC12.58□□□□□ -0.4
Nudcd1Q6PIP5 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nudcd1Q6PIP5 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nudcd1Q6PIP5 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Nudcd1Q6PIP5 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Nudcd1Q6PIP5 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Nudcd1Q6PIP5 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Nudcd1Q6PIP5 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Nudcd1Q6PIP5 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nudcd1Q6PIP5 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Nudcd1Q6PIP5 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nudcd1Q6PIP5 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nudcd1Q6PIP5 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nudcd1Q6PIP5 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nudcd1Q6PIP5 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nudcd1Q6PIP5 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms