Protein–RNA interactions for Protein: Q6PEM8

Slc46a1, Proton-coupled folate transporter, mousemouse

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a1Q6PEM8 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Slc46a1Q6PEM8 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Slc46a1Q6PEM8 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Slc46a1Q6PEM8 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Slc46a1Q6PEM8 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Slc46a1Q6PEM8 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Slc46a1Q6PEM8 Gm37737-201ENSMUST00000195013 1638 ntBASIC11.03□□□□□ -0.64
Slc46a1Q6PEM8 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Slc46a1Q6PEM8 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Slc46a1Q6PEM8 Ntrk2-204ENSMUST00000224259 3049 ntBASIC11.03□□□□□ -0.64
Slc46a1Q6PEM8 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Slc46a1Q6PEM8 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Slc46a1Q6PEM8 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Slc46a1Q6PEM8 Gm12012-201ENSMUST00000118857 1066 ntBASIC11.03□□□□□ -0.64
Slc46a1Q6PEM8 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC11.03□□□□□ -0.64
Slc46a1Q6PEM8 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Slc46a1Q6PEM8 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC11.03□□□□□ -0.64
Slc46a1Q6PEM8 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC11.03□□□□□ -0.64
Slc46a1Q6PEM8 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Slc46a1Q6PEM8 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Slc46a1Q6PEM8 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC11.03□□□□□ -0.64
Slc46a1Q6PEM8 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Slc46a1Q6PEM8 Gm16570-201ENSMUST00000161951 436 ntBASIC11.03□□□□□ -0.64
Slc46a1Q6PEM8 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Slc46a1Q6PEM8 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Slc46a1Q6PEM8 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Slc46a1Q6PEM8 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Slc46a1Q6PEM8 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC11.03□□□□□ -0.64
Slc46a1Q6PEM8 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Slc46a1Q6PEM8 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.03□□□□□ -0.64
Slc46a1Q6PEM8 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC11.03□□□□□ -0.64
Slc46a1Q6PEM8 AC073947.1-201ENSMUST00000216991 649 ntBASIC11.03□□□□□ -0.64
Slc46a1Q6PEM8 CT030182.1-201ENSMUST00000225935 533 ntBASIC11.03□□□□□ -0.64
Slc46a1Q6PEM8 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Slc46a1Q6PEM8 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Slc46a1Q6PEM8 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC11.03□□□□□ -0.64
Slc46a1Q6PEM8 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Slc46a1Q6PEM8 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
Slc46a1Q6PEM8 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Slc46a1Q6PEM8 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Slc46a1Q6PEM8 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Slc46a1Q6PEM8 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Slc46a1Q6PEM8 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Slc46a1Q6PEM8 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC11.03□□□□□ -0.64
Slc46a1Q6PEM8 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Slc46a1Q6PEM8 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Slc46a1Q6PEM8 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Slc46a1Q6PEM8 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC11.03□□□□□ -0.64
Slc46a1Q6PEM8 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC11.03□□□□□ -0.64
Slc46a1Q6PEM8 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Slc46a1Q6PEM8 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Slc46a1Q6PEM8 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Slc46a1Q6PEM8 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Slc46a1Q6PEM8 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Slc46a1Q6PEM8 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Slc46a1Q6PEM8 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Slc46a1Q6PEM8 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC11.02□□□□□ -0.64
Slc46a1Q6PEM8 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Slc46a1Q6PEM8 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Slc46a1Q6PEM8 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Slc46a1Q6PEM8 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Slc46a1Q6PEM8 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Slc46a1Q6PEM8 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC11.02□□□□□ -0.65
Slc46a1Q6PEM8 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC11.02□□□□□ -0.65
Slc46a1Q6PEM8 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Slc46a1Q6PEM8 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Slc46a1Q6PEM8 Gm24830-201ENSMUST00000102024 166 ntBASIC11.02□□□□□ -0.65
Slc46a1Q6PEM8 Gm14921-201ENSMUST00000118643 908 ntBASIC11.02□□□□□ -0.65
Slc46a1Q6PEM8 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC11.02□□□□□ -0.65
Slc46a1Q6PEM8 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Slc46a1Q6PEM8 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Slc46a1Q6PEM8 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Slc46a1Q6PEM8 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC11.02□□□□□ -0.65
Slc46a1Q6PEM8 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Slc46a1Q6PEM8 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC11.02□□□□□ -0.65
Slc46a1Q6PEM8 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.65
Slc46a1Q6PEM8 Gm25890-201ENSMUST00000177643 165 ntBASIC11.02□□□□□ -0.65
Slc46a1Q6PEM8 Rnu1b2-201ENSMUST00000178073 165 ntBASIC11.02□□□□□ -0.65
Slc46a1Q6PEM8 Rnu1b1-201ENSMUST00000178250 165 ntBASIC11.02□□□□□ -0.65
Slc46a1Q6PEM8 Gm22614-201ENSMUST00000178300 165 ntBASIC11.02□□□□□ -0.65
Slc46a1Q6PEM8 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Slc46a1Q6PEM8 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Slc46a1Q6PEM8 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC11.02□□□□□ -0.65
Slc46a1Q6PEM8 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC11.02□□□□□ -0.65
Slc46a1Q6PEM8 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC11.02□□□□□ -0.65
Slc46a1Q6PEM8 AC166095.1-201ENSMUST00000223731 1241 ntBASIC11.02□□□□□ -0.65
Slc46a1Q6PEM8 AC108416.1-202ENSMUST00000228927 1201 ntBASIC11.02□□□□□ -0.65
Slc46a1Q6PEM8 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Slc46a1Q6PEM8 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Slc46a1Q6PEM8 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Slc46a1Q6PEM8 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Slc46a1Q6PEM8 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Slc46a1Q6PEM8 Gm22042-201ENSMUST00000082989 165 ntBASIC11.02□□□□□ -0.65
Slc46a1Q6PEM8 Gm26232-201ENSMUST00000083360 166 ntBASIC11.02□□□□□ -0.65
Slc46a1Q6PEM8 Gm24136-201ENSMUST00000083374 165 ntBASIC11.02□□□□□ -0.65
Slc46a1Q6PEM8 Rnu1b6-201ENSMUST00000083839 166 ntBASIC11.02□□□□□ -0.65
Slc46a1Q6PEM8 Gm26110-201ENSMUST00000083971 165 ntBASIC11.02□□□□□ -0.65
Slc46a1Q6PEM8 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC11.02□□□□□ -0.65
Slc46a1Q6PEM8 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Slc46a1Q6PEM8 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC11.02□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms