Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC14.55□□□□□ -0.08
Smarcc2Q6PDG5 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC14.55□□□□□ -0.08
Smarcc2Q6PDG5 Gm9368-201ENSMUST00000219348 831 ntBASIC14.55□□□□□ -0.08
Smarcc2Q6PDG5 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smarcc2Q6PDG5 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smarcc2Q6PDG5 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smarcc2Q6PDG5 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Smarcc2Q6PDG5 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Smarcc2Q6PDG5 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smarcc2Q6PDG5 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smarcc2Q6PDG5 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smarcc2Q6PDG5 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC14.55□□□□□ -0.08
Smarcc2Q6PDG5 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Smarcc2Q6PDG5 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smarcc2Q6PDG5 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smarcc2Q6PDG5 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Smarcc2Q6PDG5 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smarcc2Q6PDG5 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smarcc2Q6PDG5 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smarcc2Q6PDG5 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Smarcc2Q6PDG5 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC14.55□□□□□ -0.08
Smarcc2Q6PDG5 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smarcc2Q6PDG5 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smarcc2Q6PDG5 Gm37105-201ENSMUST00000192251 2085 ntBASIC14.54□□□□□ -0.08
Smarcc2Q6PDG5 Paupar-201ENSMUST00000194826 3482 ntBASIC14.54□□□□□ -0.08
Smarcc2Q6PDG5 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smarcc2Q6PDG5 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC14.54□□□□□ -0.08
Smarcc2Q6PDG5 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Smarcc2Q6PDG5 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC14.54□□□□□ -0.08
Smarcc2Q6PDG5 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smarcc2Q6PDG5 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Smarcc2Q6PDG5 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smarcc2Q6PDG5 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Smarcc2Q6PDG5 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Smarcc2Q6PDG5 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smarcc2Q6PDG5 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC14.54□□□□□ -0.08
Smarcc2Q6PDG5 Gm11597-201ENSMUST00000121423 964 ntBASIC14.54□□□□□ -0.08
Smarcc2Q6PDG5 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Smarcc2Q6PDG5 Rmrp-201ENSMUST00000157463 271 ntBASIC14.54□□□□□ -0.08
Smarcc2Q6PDG5 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Smarcc2Q6PDG5 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Smarcc2Q6PDG5 Gm27390-201ENSMUST00000184516 176 ntBASIC14.54□□□□□ -0.08
Smarcc2Q6PDG5 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Smarcc2Q6PDG5 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC14.54□□□□□ -0.08
Smarcc2Q6PDG5 AL732506.1-201ENSMUST00000226420 281 ntBASIC14.54□□□□□ -0.08
Smarcc2Q6PDG5 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Smarcc2Q6PDG5 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC14.54□□□□□ -0.08
Smarcc2Q6PDG5 Gm3287-205ENSMUST00000228893 1332 ntBASIC14.54□□□□□ -0.08
Smarcc2Q6PDG5 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Smarcc2Q6PDG5 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smarcc2Q6PDG5 Gm3756-201ENSMUST00000169182 1355 ntBASIC14.54□□□□□ -0.08
Smarcc2Q6PDG5 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smarcc2Q6PDG5 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smarcc2Q6PDG5 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smarcc2Q6PDG5 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Smarcc2Q6PDG5 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smarcc2Q6PDG5 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smarcc2Q6PDG5 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC14.54□□□□□ -0.08
Smarcc2Q6PDG5 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Smarcc2Q6PDG5 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smarcc2Q6PDG5 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smarcc2Q6PDG5 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smarcc2Q6PDG5 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smarcc2Q6PDG5 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smarcc2Q6PDG5 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smarcc2Q6PDG5 Nudt18-202ENSMUST00000228554 3619 ntBASIC14.54□□□□□ -0.08
Smarcc2Q6PDG5 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smarcc2Q6PDG5 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smarcc2Q6PDG5 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smarcc2Q6PDG5 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Smarcc2Q6PDG5 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smarcc2Q6PDG5 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smarcc2Q6PDG5 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smarcc2Q6PDG5 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smarcc2Q6PDG5 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Smarcc2Q6PDG5 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smarcc2Q6PDG5 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC14.53□□□□□ -0.08
Smarcc2Q6PDG5 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC14.53□□□□□ -0.08
Smarcc2Q6PDG5 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Smarcc2Q6PDG5 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Smarcc2Q6PDG5 Gm14723-201ENSMUST00000118686 215 ntBASIC14.53□□□□□ -0.08
Smarcc2Q6PDG5 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Smarcc2Q6PDG5 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Smarcc2Q6PDG5 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Smarcc2Q6PDG5 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Smarcc2Q6PDG5 Gm8018-201ENSMUST00000173536 789 ntBASIC14.53□□□□□ -0.08
Smarcc2Q6PDG5 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Smarcc2Q6PDG5 Gm9022-201ENSMUST00000182482 992 ntBASIC14.53□□□□□ -0.08
Smarcc2Q6PDG5 Gm43822-201ENSMUST00000200285 476 ntBASIC14.53□□□□□ -0.08
Smarcc2Q6PDG5 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC14.53□□□□□ -0.08
Smarcc2Q6PDG5 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC14.53□□□□□ -0.08
Smarcc2Q6PDG5 AC108416.1-202ENSMUST00000228927 1201 ntBASIC14.53□□□□□ -0.08
Smarcc2Q6PDG5 Gm24136-201ENSMUST00000083374 165 ntBASIC14.53□□□□□ -0.08
Smarcc2Q6PDG5 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Smarcc2Q6PDG5 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smarcc2Q6PDG5 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC14.53□□□□□ -0.08
Smarcc2Q6PDG5 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smarcc2Q6PDG5 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smarcc2Q6PDG5 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC14.53□□□□□ -0.08
Smarcc2Q6PDG5 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms