Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sp140Q6NSQ5 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sp140Q6NSQ5 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sp140Q6NSQ5 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sp140Q6NSQ5 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12.64□□□□□ -0.39
Sp140Q6NSQ5 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sp140Q6NSQ5 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sp140Q6NSQ5 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sp140Q6NSQ5 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sp140Q6NSQ5 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sp140Q6NSQ5 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sp140Q6NSQ5 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Sp140Q6NSQ5 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sp140Q6NSQ5 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sp140Q6NSQ5 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sp140Q6NSQ5 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sp140Q6NSQ5 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Sp140Q6NSQ5 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sp140Q6NSQ5 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC12.64□□□□□ -0.39
Sp140Q6NSQ5 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC12.64□□□□□ -0.39
Sp140Q6NSQ5 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Sp140Q6NSQ5 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC12.64□□□□□ -0.39
Sp140Q6NSQ5 Gm8565-201ENSMUST00000183259 1014 ntBASIC12.64□□□□□ -0.39
Sp140Q6NSQ5 Gm45784-201ENSMUST00000188360 142 ntBASIC12.64□□□□□ -0.39
Sp140Q6NSQ5 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sp140Q6NSQ5 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sp140Q6NSQ5 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC12.64□□□□□ -0.39
Sp140Q6NSQ5 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sp140Q6NSQ5 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sp140Q6NSQ5 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sp140Q6NSQ5 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sp140Q6NSQ5 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.64□□□□□ -0.39
Sp140Q6NSQ5 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.64□□□□□ -0.39
Sp140Q6NSQ5 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sp140Q6NSQ5 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sp140Q6NSQ5 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Sp140Q6NSQ5 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.64□□□□□ -0.39
Sp140Q6NSQ5 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sp140Q6NSQ5 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.64□□□□□ -0.39
Sp140Q6NSQ5 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sp140Q6NSQ5 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sp140Q6NSQ5 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.64□□□□□ -0.39
Sp140Q6NSQ5 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sp140Q6NSQ5 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Sp140Q6NSQ5 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sp140Q6NSQ5 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
Sp140Q6NSQ5 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC12.64□□□□□ -0.39
Sp140Q6NSQ5 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sp140Q6NSQ5 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sp140Q6NSQ5 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Sp140Q6NSQ5 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sp140Q6NSQ5 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.63□□□□□ -0.39
Sp140Q6NSQ5 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sp140Q6NSQ5 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sp140Q6NSQ5 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.63□□□□□ -0.39
Sp140Q6NSQ5 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Sp140Q6NSQ5 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.63□□□□□ -0.39
Sp140Q6NSQ5 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sp140Q6NSQ5 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sp140Q6NSQ5 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sp140Q6NSQ5 Gm11425-201ENSMUST00000119608 498 ntBASIC12.63□□□□□ -0.39
Sp140Q6NSQ5 Gm11658-201ENSMUST00000120913 1008 ntBASIC12.63□□□□□ -0.39
Sp140Q6NSQ5 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sp140Q6NSQ5 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sp140Q6NSQ5 Gm2467-201ENSMUST00000182266 1010 ntBASIC12.63□□□□□ -0.39
Sp140Q6NSQ5 Gm6981-201ENSMUST00000182467 1008 ntBASIC12.63□□□□□ -0.39
Sp140Q6NSQ5 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.63□□□□□ -0.39
Sp140Q6NSQ5 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.63□□□□□ -0.39
Sp140Q6NSQ5 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.63□□□□□ -0.39
Sp140Q6NSQ5 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sp140Q6NSQ5 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sp140Q6NSQ5 AC126253.1-201ENSMUST00000227974 824 ntBASIC12.63□□□□□ -0.39
Sp140Q6NSQ5 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sp140Q6NSQ5 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sp140Q6NSQ5 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sp140Q6NSQ5 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sp140Q6NSQ5 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sp140Q6NSQ5 Gm9396-201ENSMUST00000076703 567 ntBASIC12.63□□□□□ -0.39
Sp140Q6NSQ5 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sp140Q6NSQ5 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sp140Q6NSQ5 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC12.63□□□□□ -0.39
Sp140Q6NSQ5 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sp140Q6NSQ5 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sp140Q6NSQ5 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.63□□□□□ -0.39
Sp140Q6NSQ5 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sp140Q6NSQ5 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sp140Q6NSQ5 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sp140Q6NSQ5 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Sp140Q6NSQ5 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sp140Q6NSQ5 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sp140Q6NSQ5 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sp140Q6NSQ5 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sp140Q6NSQ5 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sp140Q6NSQ5 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sp140Q6NSQ5 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sp140Q6NSQ5 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.63□□□□□ -0.39
Sp140Q6NSQ5 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.63□□□□□ -0.39
Sp140Q6NSQ5 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sp140Q6NSQ5 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sp140Q6NSQ5 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 75.2 ms