Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Foxc1Q61572 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC9.45□□□□□ -0.9
Foxc1Q61572 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Foxc1Q61572 Il17rd-203ENSMUST00000225146 3366 ntBASIC9.45□□□□□ -0.9
Foxc1Q61572 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Foxc1Q61572 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC9.45□□□□□ -0.9
Foxc1Q61572 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Foxc1Q61572 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Foxc1Q61572 Ctdspl2-203ENSMUST00000110574 1616 ntAPPRIS P3 TSL 5 BASIC9.45□□□□□ -0.9
Foxc1Q61572 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Foxc1Q61572 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Foxc1Q61572 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Foxc1Q61572 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Foxc1Q61572 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC9.45□□□□□ -0.9
Foxc1Q61572 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC9.45□□□□□ -0.9
Foxc1Q61572 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Foxc1Q61572 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Foxc1Q61572 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC9.44□□□□□ -0.9
Foxc1Q61572 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Foxc1Q61572 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Foxc1Q61572 Gm14752-201ENSMUST00000120719 2075 ntBASIC9.44□□□□□ -0.9
Foxc1Q61572 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Foxc1Q61572 Gm45011-201ENSMUST00000207620 2297 ntBASIC9.44□□□□□ -0.9
Foxc1Q61572 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Foxc1Q61572 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Foxc1Q61572 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC9.44□□□□□ -0.9
Foxc1Q61572 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC9.44□□□□□ -0.9
Foxc1Q61572 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Foxc1Q61572 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Foxc1Q61572 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Foxc1Q61572 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC9.44□□□□□ -0.9
Foxc1Q61572 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC9.44□□□□□ -0.9
Foxc1Q61572 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Foxc1Q61572 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC9.44□□□□□ -0.9
Foxc1Q61572 Gm8215-201ENSMUST00000120627 990 ntBASIC9.44□□□□□ -0.9
Foxc1Q61572 Gm1848-201ENSMUST00000120711 789 ntBASIC9.44□□□□□ -0.9
Foxc1Q61572 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Foxc1Q61572 Gm22985-201ENSMUST00000122754 116 ntBASIC9.44□□□□□ -0.9
Foxc1Q61572 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC9.44□□□□□ -0.9
Foxc1Q61572 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Foxc1Q61572 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC9.44□□□□□ -0.9
Foxc1Q61572 Gm17727-201ENSMUST00000171898 643 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Foxc1Q61572 Scnm1-201ENSMUST00000172572 1054 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Foxc1Q61572 Gm3047-202ENSMUST00000177998 618 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Foxc1Q61572 Gm8297-203ENSMUST00000178389 618 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Foxc1Q61572 Gm3460-202ENSMUST00000178927 618 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Foxc1Q61572 Gm21103-203ENSMUST00000179042 618 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Foxc1Q61572 Gm8159-203ENSMUST00000179231 618 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Foxc1Q61572 Gm3029-202ENSMUST00000179327 618 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Foxc1Q61572 Gm27010-201ENSMUST00000182727 863 ntTSL 3 BASIC9.44□□□□□ -0.9
Foxc1Q61572 Gm29043-201ENSMUST00000186371 623 ntTSL 5 BASIC9.44□□□□□ -0.9
Foxc1Q61572 Gm19030-201ENSMUST00000194947 552 ntBASIC9.44□□□□□ -0.9
Foxc1Q61572 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC9.44□□□□□ -0.9
Foxc1Q61572 Gm44353-201ENSMUST00000200618 138 ntBASIC9.44□□□□□ -0.9
Foxc1Q61572 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC9.44□□□□□ -0.9
Foxc1Q61572 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Foxc1Q61572 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Foxc1Q61572 Gm44332-201ENSMUST00000203712 433 ntBASIC9.44□□□□□ -0.9
Foxc1Q61572 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC9.44□□□□□ -0.9
Foxc1Q61572 Gm45331-201ENSMUST00000209868 554 ntBASIC9.44□□□□□ -0.9
Foxc1Q61572 AC116589.9-201ENSMUST00000221462 908 ntBASIC9.44□□□□□ -0.9
Foxc1Q61572 Hmgb1-ps11-201ENSMUST00000221749 621 ntBASIC9.44□□□□□ -0.9
Foxc1Q61572 Med21-201ENSMUST00000032429 814 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Foxc1Q61572 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Foxc1Q61572 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Foxc1Q61572 Scgb2b24-201ENSMUST00000055444 523 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Foxc1Q61572 Gpr87-201ENSMUST00000056898 1080 ntBASIC9.44□□□□□ -0.9
Foxc1Q61572 Obp1b-201ENSMUST00000088198 797 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Foxc1Q61572 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC9.44□□□□□ -0.9
Foxc1Q61572 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Foxc1Q61572 Milr1-201ENSMUST00000086353 1348 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Foxc1Q61572 Gm18630-201ENSMUST00000222109 1397 ntBASIC9.44□□□□□ -0.9
Foxc1Q61572 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Foxc1Q61572 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Foxc1Q61572 Gm37234-201ENSMUST00000193259 1441 ntBASIC9.44□□□□□ -0.9
Foxc1Q61572 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Foxc1Q61572 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Foxc1Q61572 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Foxc1Q61572 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Foxc1Q61572 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Foxc1Q61572 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Foxc1Q61572 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Foxc1Q61572 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Foxc1Q61572 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Foxc1Q61572 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Foxc1Q61572 Abhd6-203ENSMUST00000225234 1958 ntBASIC9.44□□□□□ -0.9
Foxc1Q61572 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Foxc1Q61572 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Foxc1Q61572 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Foxc1Q61572 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Foxc1Q61572 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Foxc1Q61572 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Foxc1Q61572 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Foxc1Q61572 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Foxc1Q61572 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Foxc1Q61572 Gm26684-202ENSMUST00000228229 8257 ntBASIC9.44□□□□□ -0.9
Foxc1Q61572 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Foxc1Q61572 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Foxc1Q61572 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Foxc1Q61572 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms