Protein–RNA interactions for Protein: Q61457

Ccne1, G1/S-specific cyclin-E1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccne1Q61457 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccne1Q61457 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC16.16■□□□□ 0.18
Ccne1Q61457 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Ccne1Q61457 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ccne1Q61457 AC166992.1-201ENSMUST00000216356 565 ntBASIC16.16■□□□□ 0.18
Ccne1Q61457 CT009713.8-201ENSMUST00000225448 560 ntBASIC16.16■□□□□ 0.18
Ccne1Q61457 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccne1Q61457 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC16.16■□□□□ 0.18
Ccne1Q61457 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccne1Q61457 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccne1Q61457 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccne1Q61457 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccne1Q61457 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccne1Q61457 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ccne1Q61457 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ccne1Q61457 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Ccne1Q61457 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccne1Q61457 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccne1Q61457 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccne1Q61457 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ccne1Q61457 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Ccne1Q61457 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ccne1Q61457 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ccne1Q61457 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccne1Q61457 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Ccne1Q61457 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Ccne1Q61457 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC16.15■□□□□ 0.18
Ccne1Q61457 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC16.15■□□□□ 0.18
Ccne1Q61457 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ccne1Q61457 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC16.15■□□□□ 0.18
Ccne1Q61457 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccne1Q61457 AC125486.1-201ENSMUST00000218701 320 ntBASIC16.15■□□□□ 0.18
Ccne1Q61457 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC16.15■□□□□ 0.18
Ccne1Q61457 Gm1821-202ENSMUST00000227415 750 ntBASIC16.15■□□□□ 0.18
Ccne1Q61457 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccne1Q61457 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccne1Q61457 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccne1Q61457 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Ccne1Q61457 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccne1Q61457 Gm45643-201ENSMUST00000211364 1484 ntBASIC16.15■□□□□ 0.18
Ccne1Q61457 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ccne1Q61457 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccne1Q61457 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
Ccne1Q61457 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC16.14■□□□□ 0.18
Ccne1Q61457 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccne1Q61457 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccne1Q61457 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccne1Q61457 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Ccne1Q61457 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccne1Q61457 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccne1Q61457 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Ccne1Q61457 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccne1Q61457 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Ccne1Q61457 Gm28719-201ENSMUST00000187779 1757 ntBASIC16.14■□□□□ 0.17
Ccne1Q61457 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccne1Q61457 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC16.14■□□□□ 0.17
Ccne1Q61457 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccne1Q61457 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccne1Q61457 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
Ccne1Q61457 Rprl1-201ENSMUST00000158050 327 ntBASIC16.14■□□□□ 0.17
Ccne1Q61457 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC16.14■□□□□ 0.17
Ccne1Q61457 Gm19459-201ENSMUST00000176240 835 ntBASIC16.14■□□□□ 0.17
Ccne1Q61457 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ccne1Q61457 Gm3332-201ENSMUST00000189337 928 ntBASIC16.14■□□□□ 0.17
Ccne1Q61457 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccne1Q61457 Gm4482-201ENSMUST00000200876 742 ntBASIC16.14■□□□□ 0.17
Ccne1Q61457 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ccne1Q61457 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ccne1Q61457 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC16.14■□□□□ 0.17
Ccne1Q61457 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccne1Q61457 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccne1Q61457 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ccne1Q61457 Gm26448-201ENSMUST00000082446 203 ntBASIC16.14■□□□□ 0.17
Ccne1Q61457 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccne1Q61457 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ccne1Q61457 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ccne1Q61457 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ccne1Q61457 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccne1Q61457 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Ccne1Q61457 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccne1Q61457 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccne1Q61457 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccne1Q61457 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
Ccne1Q61457 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccne1Q61457 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ccne1Q61457 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccne1Q61457 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ccne1Q61457 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccne1Q61457 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccne1Q61457 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC16.14■□□□□ 0.17
Ccne1Q61457 AC126262.1-201ENSMUST00000221802 1904 ntBASIC16.13■□□□□ 0.17
Ccne1Q61457 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Ccne1Q61457 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Ccne1Q61457 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Ccne1Q61457 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ccne1Q61457 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ccne1Q61457 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccne1Q61457 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccne1Q61457 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccne1Q61457 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 70.2 ms