Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 AC154517.2-201ENSMUST00000220829 2458 ntBASIC13.79□□□□□ -0.2
Ift88Q61371 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ift88Q61371 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ift88Q61371 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ift88Q61371 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ift88Q61371 Gm2238-201ENSMUST00000192074 3669 ntBASIC13.78□□□□□ -0.2
Ift88Q61371 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ift88Q61371 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ift88Q61371 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Ift88Q61371 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ift88Q61371 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ift88Q61371 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ift88Q61371 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Ift88Q61371 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ift88Q61371 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ift88Q61371 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC13.78□□□□□ -0.2
Ift88Q61371 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC13.78□□□□□ -0.2
Ift88Q61371 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC13.78□□□□□ -0.2
Ift88Q61371 CT025535.1-201ENSMUST00000227172 491 ntBASIC13.78□□□□□ -0.2
Ift88Q61371 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ift88Q61371 Gm5356-201ENSMUST00000093326 615 ntBASIC13.78□□□□□ -0.2
Ift88Q61371 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ift88Q61371 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ift88Q61371 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC13.78□□□□□ -0.2
Ift88Q61371 Gm13050-201ENSMUST00000122149 1345 ntBASIC13.78□□□□□ -0.2
Ift88Q61371 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC13.78□□□□□ -0.2
Ift88Q61371 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ift88Q61371 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ift88Q61371 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ift88Q61371 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ift88Q61371 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ift88Q61371 AC160405.1-201ENSMUST00000218207 1545 ntBASIC13.78□□□□□ -0.2
Ift88Q61371 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ift88Q61371 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ift88Q61371 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ift88Q61371 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Ift88Q61371 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Ift88Q61371 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Ift88Q61371 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ift88Q61371 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Ift88Q61371 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ift88Q61371 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ift88Q61371 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Ift88Q61371 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Ift88Q61371 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Ift88Q61371 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Ift88Q61371 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC13.77□□□□□ -0.21
Ift88Q61371 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ift88Q61371 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ift88Q61371 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Ift88Q61371 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Ift88Q61371 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC13.77□□□□□ -0.21
Ift88Q61371 Gm22331-201ENSMUST00000158066 136 ntBASIC13.77□□□□□ -0.21
Ift88Q61371 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ift88Q61371 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Ift88Q61371 Gm17794-201ENSMUST00000220252 955 ntBASIC13.77□□□□□ -0.21
Ift88Q61371 Rubie-203ENSMUST00000227803 2430 ntBASIC13.77□□□□□ -0.21
Ift88Q61371 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ift88Q61371 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ift88Q61371 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ift88Q61371 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Ift88Q61371 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ift88Q61371 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ift88Q61371 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Ift88Q61371 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ift88Q61371 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ift88Q61371 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Ift88Q61371 Gm43075-201ENSMUST00000198613 3905 ntBASIC13.77□□□□□ -0.21
Ift88Q61371 Paupar-201ENSMUST00000194826 3482 ntBASIC13.77□□□□□ -0.21
Ift88Q61371 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC13.77□□□□□ -0.21
Ift88Q61371 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ift88Q61371 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ift88Q61371 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ift88Q61371 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
Ift88Q61371 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
Ift88Q61371 Gm10728-201ENSMUST00000194292 1829 ntBASIC13.76□□□□□ -0.21
Ift88Q61371 Gm43823-201ENSMUST00000197391 1808 ntBASIC13.76□□□□□ -0.21
Ift88Q61371 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC13.76□□□□□ -0.21
Ift88Q61371 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ift88Q61371 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ift88Q61371 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ift88Q61371 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ift88Q61371 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ift88Q61371 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
Ift88Q61371 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ift88Q61371 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ift88Q61371 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ift88Q61371 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ift88Q61371 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ift88Q61371 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC13.76□□□□□ -0.21
Ift88Q61371 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Ift88Q61371 Gm8652-201ENSMUST00000181363 964 ntBASIC13.76□□□□□ -0.21
Ift88Q61371 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ift88Q61371 AC154239.3-201ENSMUST00000226933 674 ntBASIC13.76□□□□□ -0.21
Ift88Q61371 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ift88Q61371 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ift88Q61371 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ift88Q61371 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC13.76□□□□□ -0.21
Ift88Q61371 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC13.76□□□□□ -0.21
Ift88Q61371 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms