Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Olfr582-201ENSMUST00000098212 960 ntBASIC12.57□□□□□ -0.4
Six4Q61321 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Six4Q61321 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Six4Q61321 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Six4Q61321 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Six4Q61321 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Six4Q61321 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
Six4Q61321 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Six4Q61321 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Six4Q61321 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Six4Q61321 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.57□□□□□ -0.4
Six4Q61321 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.57□□□□□ -0.4
Six4Q61321 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Six4Q61321 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Six4Q61321 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
Six4Q61321 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Six4Q61321 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Six4Q61321 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Six4Q61321 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Six4Q61321 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Six4Q61321 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Six4Q61321 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Six4Q61321 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.56□□□□□ -0.4
Six4Q61321 Gm2606-201ENSMUST00000100754 1002 ntBASIC12.56□□□□□ -0.4
Six4Q61321 Gm23270-201ENSMUST00000104055 131 ntBASIC12.56□□□□□ -0.4
Six4Q61321 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Six4Q61321 Gm11222-201ENSMUST00000119005 738 ntBASIC12.56□□□□□ -0.4
Six4Q61321 Gm12286-201ENSMUST00000119246 1002 ntBASIC12.56□□□□□ -0.4
Six4Q61321 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
Six4Q61321 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC12.56□□□□□ -0.4
Six4Q61321 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Six4Q61321 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Six4Q61321 Gm26956-201ENSMUST00000182176 986 ntBASIC12.56□□□□□ -0.4
Six4Q61321 Gm38341-201ENSMUST00000195357 515 ntBASIC12.56□□□□□ -0.4
Six4Q61321 Gm8712-201ENSMUST00000221090 701 ntBASIC12.56□□□□□ -0.4
Six4Q61321 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Six4Q61321 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Six4Q61321 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Six4Q61321 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Six4Q61321 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Six4Q61321 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.56□□□□□ -0.4
Six4Q61321 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.56□□□□□ -0.4
Six4Q61321 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
Six4Q61321 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Six4Q61321 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Six4Q61321 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.56□□□□□ -0.4
Six4Q61321 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Six4Q61321 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Six4Q61321 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Six4Q61321 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Six4Q61321 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Six4Q61321 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Six4Q61321 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Six4Q61321 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Six4Q61321 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Six4Q61321 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Six4Q61321 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Six4Q61321 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Six4Q61321 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Six4Q61321 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Six4Q61321 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Six4Q61321 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Six4Q61321 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Six4Q61321 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Six4Q61321 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC12.55□□□□□ -0.4
Six4Q61321 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Six4Q61321 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC12.55□□□□□ -0.4
Six4Q61321 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Six4Q61321 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC12.55□□□□□ -0.4
Six4Q61321 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Six4Q61321 Gm43822-201ENSMUST00000200285 476 ntBASIC12.55□□□□□ -0.4
Six4Q61321 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.55□□□□□ -0.4
Six4Q61321 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.55□□□□□ -0.4
Six4Q61321 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Six4Q61321 AC122371.3-201ENSMUST00000223402 1061 ntBASIC12.55□□□□□ -0.4
Six4Q61321 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Six4Q61321 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Six4Q61321 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Six4Q61321 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Six4Q61321 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Six4Q61321 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Six4Q61321 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Six4Q61321 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Six4Q61321 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Six4Q61321 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Six4Q61321 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Six4Q61321 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.54□□□□□ -0.4
Six4Q61321 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Six4Q61321 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Six4Q61321 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Six4Q61321 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Six4Q61321 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Six4Q61321 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Six4Q61321 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Six4Q61321 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Six4Q61321 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.54□□□□□ -0.4
Six4Q61321 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Six4Q61321 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Six4Q61321 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC12.54□□□□□ -0.4
Six4Q61321 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms