Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC11.99□□□□□ -0.49
ClpbQ60649 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC11.99□□□□□ -0.49
ClpbQ60649 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
ClpbQ60649 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC11.99□□□□□ -0.49
ClpbQ60649 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
ClpbQ60649 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
ClpbQ60649 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ClpbQ60649 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
ClpbQ60649 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ClpbQ60649 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
ClpbQ60649 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
ClpbQ60649 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
ClpbQ60649 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ClpbQ60649 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ClpbQ60649 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
ClpbQ60649 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ClpbQ60649 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
ClpbQ60649 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
ClpbQ60649 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
ClpbQ60649 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
ClpbQ60649 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
ClpbQ60649 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
ClpbQ60649 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ClpbQ60649 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ClpbQ60649 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC11.98□□□□□ -0.49
ClpbQ60649 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
ClpbQ60649 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ClpbQ60649 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
ClpbQ60649 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC11.98□□□□□ -0.49
ClpbQ60649 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC11.98□□□□□ -0.49
ClpbQ60649 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC11.98□□□□□ -0.49
ClpbQ60649 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC11.98□□□□□ -0.49
ClpbQ60649 Gm12241-201ENSMUST00000118330 726 ntBASIC11.98□□□□□ -0.49
ClpbQ60649 Gm12502-201ENSMUST00000120197 444 ntBASIC11.98□□□□□ -0.49
ClpbQ60649 Gm24548-201ENSMUST00000158650 108 ntBASIC11.98□□□□□ -0.49
ClpbQ60649 Gm8738-201ENSMUST00000172606 329 ntBASIC11.98□□□□□ -0.49
ClpbQ60649 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC11.98□□□□□ -0.49
ClpbQ60649 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC11.98□□□□□ -0.49
ClpbQ60649 Gm5904-201ENSMUST00000210286 865 ntBASIC11.98□□□□□ -0.49
ClpbQ60649 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
ClpbQ60649 Gm32025-201ENSMUST00000217960 307 ntBASIC11.98□□□□□ -0.49
ClpbQ60649 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ClpbQ60649 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
ClpbQ60649 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
ClpbQ60649 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ClpbQ60649 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ClpbQ60649 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.98□□□□□ -0.49
ClpbQ60649 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ClpbQ60649 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
ClpbQ60649 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
ClpbQ60649 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ClpbQ60649 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ClpbQ60649 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
ClpbQ60649 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ClpbQ60649 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC11.97□□□□□ -0.49
ClpbQ60649 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ClpbQ60649 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
ClpbQ60649 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ClpbQ60649 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ClpbQ60649 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ClpbQ60649 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
ClpbQ60649 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ClpbQ60649 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ClpbQ60649 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
ClpbQ60649 Gm10434-201ENSMUST00000101158 471 ntBASIC11.97□□□□□ -0.49
ClpbQ60649 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC11.97□□□□□ -0.49
ClpbQ60649 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
ClpbQ60649 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ClpbQ60649 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
ClpbQ60649 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
ClpbQ60649 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
ClpbQ60649 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC11.97□□□□□ -0.49
ClpbQ60649 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC11.97□□□□□ -0.49
ClpbQ60649 Mospd4-201ENSMUST00000180618 576 ntBASIC11.97□□□□□ -0.49
ClpbQ60649 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC11.97□□□□□ -0.49
ClpbQ60649 Gm37489-201ENSMUST00000191883 159 ntBASIC11.97□□□□□ -0.49
ClpbQ60649 Gm44364-201ENSMUST00000198368 141 ntBASIC11.97□□□□□ -0.49
ClpbQ60649 Gm44124-201ENSMUST00000204159 472 ntBASIC11.97□□□□□ -0.49
ClpbQ60649 Gm44772-201ENSMUST00000207623 1191 ntBASIC11.97□□□□□ -0.49
ClpbQ60649 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC11.97□□□□□ -0.49
ClpbQ60649 Gm10608-202ENSMUST00000213924 676 ntBASIC11.97□□□□□ -0.49
ClpbQ60649 Gm9368-201ENSMUST00000219348 831 ntBASIC11.97□□□□□ -0.49
ClpbQ60649 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ClpbQ60649 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ClpbQ60649 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
ClpbQ60649 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ClpbQ60649 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ClpbQ60649 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC11.97□□□□□ -0.49
ClpbQ60649 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
ClpbQ60649 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
ClpbQ60649 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
ClpbQ60649 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ClpbQ60649 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
ClpbQ60649 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
ClpbQ60649 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
ClpbQ60649 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
ClpbQ60649 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
ClpbQ60649 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
ClpbQ60649 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
ClpbQ60649 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms