Protein–RNA interactions for Protein: Q60636

Prdm1, PR domain zinc finger protein 1, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm1Q60636 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Prdm1Q60636 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC14.55□□□□□ -0.08
Prdm1Q60636 Gm3961-201ENSMUST00000204425 994 ntBASIC14.55□□□□□ -0.08
Prdm1Q60636 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Prdm1Q60636 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Prdm1Q60636 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Prdm1Q60636 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Prdm1Q60636 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
Prdm1Q60636 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Prdm1Q60636 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Prdm1Q60636 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Prdm1Q60636 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC14.55□□□□□ -0.08
Prdm1Q60636 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Prdm1Q60636 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Prdm1Q60636 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Prdm1Q60636 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC14.54□□□□□ -0.08
Prdm1Q60636 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Prdm1Q60636 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Prdm1Q60636 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Prdm1Q60636 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Prdm1Q60636 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Prdm1Q60636 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Prdm1Q60636 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC14.54□□□□□ -0.08
Prdm1Q60636 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Prdm1Q60636 Gm14832-201ENSMUST00000121289 322 ntBASIC14.54□□□□□ -0.08
Prdm1Q60636 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Prdm1Q60636 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Prdm1Q60636 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Prdm1Q60636 Gm23119-201ENSMUST00000158610 140 ntBASIC14.54□□□□□ -0.08
Prdm1Q60636 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC14.54□□□□□ -0.08
Prdm1Q60636 Gm44364-201ENSMUST00000198368 141 ntBASIC14.54□□□□□ -0.08
Prdm1Q60636 Gm21769-201ENSMUST00000211922 111 ntBASIC14.54□□□□□ -0.08
Prdm1Q60636 Gm7172-201ENSMUST00000218047 1152 ntBASIC14.54□□□□□ -0.08
Prdm1Q60636 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Prdm1Q60636 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Prdm1Q60636 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Prdm1Q60636 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Prdm1Q60636 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Prdm1Q60636 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Prdm1Q60636 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Prdm1Q60636 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Prdm1Q60636 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Prdm1Q60636 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Prdm1Q60636 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Prdm1Q60636 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Prdm1Q60636 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Prdm1Q60636 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Prdm1Q60636 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Prdm1Q60636 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Prdm1Q60636 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Prdm1Q60636 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Prdm1Q60636 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Prdm1Q60636 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Prdm1Q60636 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Prdm1Q60636 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Prdm1Q60636 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Prdm1Q60636 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Prdm1Q60636 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Prdm1Q60636 Adra1a-206ENSMUST00000225182 2337 ntBASIC14.53□□□□□ -0.08
Prdm1Q60636 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Prdm1Q60636 Gm8038-201ENSMUST00000164674 2044 ntBASIC14.53□□□□□ -0.08
Prdm1Q60636 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Prdm1Q60636 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Prdm1Q60636 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Prdm1Q60636 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Prdm1Q60636 Gm8862-201ENSMUST00000198379 1346 ntBASIC14.53□□□□□ -0.08
Prdm1Q60636 Gm24255-201ENSMUST00000104481 128 ntBASIC14.53□□□□□ -0.08
Prdm1Q60636 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC14.53□□□□□ -0.08
Prdm1Q60636 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Prdm1Q60636 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Prdm1Q60636 Gm37259-201ENSMUST00000193903 849 ntBASIC14.53□□□□□ -0.08
Prdm1Q60636 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Prdm1Q60636 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Prdm1Q60636 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Prdm1Q60636 Gm8712-201ENSMUST00000221090 701 ntBASIC14.53□□□□□ -0.08
Prdm1Q60636 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Prdm1Q60636 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Prdm1Q60636 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Prdm1Q60636 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Prdm1Q60636 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Prdm1Q60636 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Prdm1Q60636 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
Prdm1Q60636 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Prdm1Q60636 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Prdm1Q60636 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Prdm1Q60636 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Prdm1Q60636 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Prdm1Q60636 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Prdm1Q60636 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Prdm1Q60636 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Prdm1Q60636 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Prdm1Q60636 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC14.52□□□□□ -0.08
Prdm1Q60636 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Prdm1Q60636 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Prdm1Q60636 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Prdm1Q60636 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Prdm1Q60636 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC14.52□□□□□ -0.08
Prdm1Q60636 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Prdm1Q60636 Gm11222-201ENSMUST00000119005 738 ntBASIC14.52□□□□□ -0.09
Prdm1Q60636 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 100.4 ms