Protein–RNA interactions for Protein: Q5PSV9

Mdc1, Mediator of DNA damage checkpoint protein 1, mousemouse

Predictions only

Length 1,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mdc1Q5PSV9 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Mdc1Q5PSV9 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Mdc1Q5PSV9 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.1■□□□□ 0.17
Mdc1Q5PSV9 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Mdc1Q5PSV9 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Mdc1Q5PSV9 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Mdc1Q5PSV9 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Mdc1Q5PSV9 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Mdc1Q5PSV9 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC16.09■□□□□ 0.17
Mdc1Q5PSV9 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Mdc1Q5PSV9 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Mdc1Q5PSV9 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Mdc1Q5PSV9 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Mdc1Q5PSV9 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Mdc1Q5PSV9 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Mdc1Q5PSV9 Gm15573-201ENSMUST00000119487 540 ntBASIC16.09■□□□□ 0.17
Mdc1Q5PSV9 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Mdc1Q5PSV9 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC16.09■□□□□ 0.17
Mdc1Q5PSV9 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC16.09■□□□□ 0.17
Mdc1Q5PSV9 Gm8815-201ENSMUST00000173809 620 ntBASIC16.09■□□□□ 0.17
Mdc1Q5PSV9 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Mdc1Q5PSV9 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC16.09■□□□□ 0.17
Mdc1Q5PSV9 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC16.09■□□□□ 0.17
Mdc1Q5PSV9 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Mdc1Q5PSV9 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Mdc1Q5PSV9 Gm5780-201ENSMUST00000217774 1834 ntBASIC16.09■□□□□ 0.17
Mdc1Q5PSV9 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Mdc1Q5PSV9 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Mdc1Q5PSV9 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Mdc1Q5PSV9 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Mdc1Q5PSV9 Gm43570-201ENSMUST00000199951 3688 ntBASIC16.09■□□□□ 0.17
Mdc1Q5PSV9 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Mdc1Q5PSV9 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Mdc1Q5PSV9 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Mdc1Q5PSV9 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Mdc1Q5PSV9 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Mdc1Q5PSV9 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Mdc1Q5PSV9 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
Mdc1Q5PSV9 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Mdc1Q5PSV9 Gm20392-201ENSMUST00000173047 701 ntBASIC16.08■□□□□ 0.17
Mdc1Q5PSV9 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Mdc1Q5PSV9 Gm45575-201ENSMUST00000210283 548 ntBASIC16.08■□□□□ 0.17
Mdc1Q5PSV9 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Mdc1Q5PSV9 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
Mdc1Q5PSV9 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
Mdc1Q5PSV9 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC16.08■□□□□ 0.17
Mdc1Q5PSV9 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Mdc1Q5PSV9 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Mdc1Q5PSV9 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Mdc1Q5PSV9 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
Mdc1Q5PSV9 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Mdc1Q5PSV9 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Mdc1Q5PSV9 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Mdc1Q5PSV9 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Mdc1Q5PSV9 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Mdc1Q5PSV9 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Mdc1Q5PSV9 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Mdc1Q5PSV9 Gm37437-201ENSMUST00000194451 1937 ntBASIC16.08■□□□□ 0.16
Mdc1Q5PSV9 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC16.08■□□□□ 0.16
Mdc1Q5PSV9 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
Mdc1Q5PSV9 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC16.08■□□□□ 0.16
Mdc1Q5PSV9 Gm29499-201ENSMUST00000189151 486 ntBASIC16.08■□□□□ 0.16
Mdc1Q5PSV9 Gm28329-201ENSMUST00000191208 689 ntBASIC16.08■□□□□ 0.16
Mdc1Q5PSV9 Gm29171-201ENSMUST00000191397 486 ntBASIC16.08■□□□□ 0.16
Mdc1Q5PSV9 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Mdc1Q5PSV9 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Mdc1Q5PSV9 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Mdc1Q5PSV9 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC16.07■□□□□ 0.16
Mdc1Q5PSV9 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Mdc1Q5PSV9 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Mdc1Q5PSV9 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Mdc1Q5PSV9 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Mdc1Q5PSV9 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Mdc1Q5PSV9 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Mdc1Q5PSV9 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Mdc1Q5PSV9 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Mdc1Q5PSV9 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
Mdc1Q5PSV9 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC16.07■□□□□ 0.16
Mdc1Q5PSV9 Gm12856-201ENSMUST00000119471 1293 ntBASIC16.07■□□□□ 0.16
Mdc1Q5PSV9 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC16.07■□□□□ 0.16
Mdc1Q5PSV9 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Mdc1Q5PSV9 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC16.07■□□□□ 0.16
Mdc1Q5PSV9 Gm9192-201ENSMUST00000183221 985 ntBASIC16.07■□□□□ 0.16
Mdc1Q5PSV9 Gm28686-201ENSMUST00000187404 609 ntBASIC16.07■□□□□ 0.16
Mdc1Q5PSV9 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC16.07■□□□□ 0.16
Mdc1Q5PSV9 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Mdc1Q5PSV9 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Mdc1Q5PSV9 Gm6867-201ENSMUST00000219165 425 ntBASIC16.07■□□□□ 0.16
Mdc1Q5PSV9 AC121960.1-201ENSMUST00000227982 564 ntBASIC16.07■□□□□ 0.16
Mdc1Q5PSV9 CT030637.1-201ENSMUST00000228016 669 ntBASIC16.07■□□□□ 0.16
Mdc1Q5PSV9 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Mdc1Q5PSV9 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Mdc1Q5PSV9 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Mdc1Q5PSV9 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Mdc1Q5PSV9 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Mdc1Q5PSV9 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC16.07■□□□□ 0.16
Mdc1Q5PSV9 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC16.07■□□□□ 0.16
Mdc1Q5PSV9 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Mdc1Q5PSV9 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Mdc1Q5PSV9 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms