Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rc3h1Q4VGL6 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rc3h1Q4VGL6 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rc3h1Q4VGL6 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC14.42□□□□□ -0.1
Rc3h1Q4VGL6 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rc3h1Q4VGL6 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Rc3h1Q4VGL6 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Rc3h1Q4VGL6 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rc3h1Q4VGL6 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rc3h1Q4VGL6 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rc3h1Q4VGL6 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC14.42□□□□□ -0.1
Rc3h1Q4VGL6 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rc3h1Q4VGL6 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rc3h1Q4VGL6 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rc3h1Q4VGL6 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Rc3h1Q4VGL6 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC14.41□□□□□ -0.1
Rc3h1Q4VGL6 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rc3h1Q4VGL6 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rc3h1Q4VGL6 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rc3h1Q4VGL6 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rc3h1Q4VGL6 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rc3h1Q4VGL6 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rc3h1Q4VGL6 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
Rc3h1Q4VGL6 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rc3h1Q4VGL6 Gm12286-201ENSMUST00000119246 1002 ntBASIC14.41□□□□□ -0.1
Rc3h1Q4VGL6 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Rc3h1Q4VGL6 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rc3h1Q4VGL6 Gm32999-201ENSMUST00000192693 562 ntBASIC14.41□□□□□ -0.1
Rc3h1Q4VGL6 Gm9445-201ENSMUST00000207454 1285 ntBASIC14.41□□□□□ -0.1
Rc3h1Q4VGL6 Gm45598-202ENSMUST00000210719 986 ntBASIC14.41□□□□□ -0.1
Rc3h1Q4VGL6 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rc3h1Q4VGL6 Gm8385-201ENSMUST00000058999 643 ntBASIC14.41□□□□□ -0.1
Rc3h1Q4VGL6 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rc3h1Q4VGL6 Gm9996-201ENSMUST00000070359 913 ntBASIC14.41□□□□□ -0.1
Rc3h1Q4VGL6 Gm18227-201ENSMUST00000211082 1468 ntBASIC14.41□□□□□ -0.1
Rc3h1Q4VGL6 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rc3h1Q4VGL6 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rc3h1Q4VGL6 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rc3h1Q4VGL6 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rc3h1Q4VGL6 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rc3h1Q4VGL6 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rc3h1Q4VGL6 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rc3h1Q4VGL6 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC14.41□□□□□ -0.1
Rc3h1Q4VGL6 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rc3h1Q4VGL6 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rc3h1Q4VGL6 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rc3h1Q4VGL6 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rc3h1Q4VGL6 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rc3h1Q4VGL6 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Rc3h1Q4VGL6 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rc3h1Q4VGL6 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rc3h1Q4VGL6 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rc3h1Q4VGL6 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rc3h1Q4VGL6 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC14.41□□□□□ -0.1
Rc3h1Q4VGL6 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rc3h1Q4VGL6 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rc3h1Q4VGL6 Gm5846-201ENSMUST00000193146 1414 ntBASIC14.41□□□□□ -0.1
Rc3h1Q4VGL6 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rc3h1Q4VGL6 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rc3h1Q4VGL6 Gm27194-201ENSMUST00000175753 2936 ntBASIC14.4□□□□□ -0.1
Rc3h1Q4VGL6 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
Rc3h1Q4VGL6 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rc3h1Q4VGL6 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Rc3h1Q4VGL6 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rc3h1Q4VGL6 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rc3h1Q4VGL6 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Rc3h1Q4VGL6 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC14.4□□□□□ -0.1
Rc3h1Q4VGL6 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rc3h1Q4VGL6 Gm12217-201ENSMUST00000118858 696 ntBASIC14.4□□□□□ -0.1
Rc3h1Q4VGL6 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rc3h1Q4VGL6 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC14.4□□□□□ -0.1
Rc3h1Q4VGL6 Gm24749-201ENSMUST00000157838 343 ntBASIC14.4□□□□□ -0.1
Rc3h1Q4VGL6 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Rc3h1Q4VGL6 Gm37666-201ENSMUST00000194110 866 ntBASIC14.4□□□□□ -0.1
Rc3h1Q4VGL6 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rc3h1Q4VGL6 Gm44958-201ENSMUST00000203734 736 ntBASIC14.4□□□□□ -0.1
Rc3h1Q4VGL6 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rc3h1Q4VGL6 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC14.4□□□□□ -0.1
Rc3h1Q4VGL6 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Rc3h1Q4VGL6 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rc3h1Q4VGL6 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rc3h1Q4VGL6 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rc3h1Q4VGL6 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rc3h1Q4VGL6 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rc3h1Q4VGL6 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Rc3h1Q4VGL6 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rc3h1Q4VGL6 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rc3h1Q4VGL6 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC14.4□□□□□ -0.1
Rc3h1Q4VGL6 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rc3h1Q4VGL6 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Rc3h1Q4VGL6 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC14.4□□□□□ -0.1
Rc3h1Q4VGL6 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rc3h1Q4VGL6 CU062626.3-201ENSMUST00000225522 1411 ntBASIC14.4□□□□□ -0.1
Rc3h1Q4VGL6 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC14.4□□□□□ -0.1
Rc3h1Q4VGL6 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rc3h1Q4VGL6 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rc3h1Q4VGL6 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Rc3h1Q4VGL6 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rc3h1Q4VGL6 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rc3h1Q4VGL6 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms