Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Syne3Q4FZC9 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
Syne3Q4FZC9 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC13.27□□□□□ -0.29
Syne3Q4FZC9 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Syne3Q4FZC9 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Syne3Q4FZC9 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC13.27□□□□□ -0.29
Syne3Q4FZC9 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Syne3Q4FZC9 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Syne3Q4FZC9 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Syne3Q4FZC9 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Syne3Q4FZC9 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Syne3Q4FZC9 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Syne3Q4FZC9 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Syne3Q4FZC9 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Syne3Q4FZC9 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Syne3Q4FZC9 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Syne3Q4FZC9 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Syne3Q4FZC9 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Syne3Q4FZC9 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Syne3Q4FZC9 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Syne3Q4FZC9 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Syne3Q4FZC9 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Syne3Q4FZC9 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC13.26□□□□□ -0.29
Syne3Q4FZC9 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
Syne3Q4FZC9 Gm5187-201ENSMUST00000117317 991 ntBASIC13.26□□□□□ -0.29
Syne3Q4FZC9 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Syne3Q4FZC9 Gm5638-201ENSMUST00000118618 1258 ntBASIC13.26□□□□□ -0.29
Syne3Q4FZC9 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Syne3Q4FZC9 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Syne3Q4FZC9 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC13.26□□□□□ -0.29
Syne3Q4FZC9 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Syne3Q4FZC9 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Syne3Q4FZC9 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Syne3Q4FZC9 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC13.26□□□□□ -0.29
Syne3Q4FZC9 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC13.26□□□□□ -0.29
Syne3Q4FZC9 Gm19184-201ENSMUST00000196798 928 ntBASIC13.26□□□□□ -0.29
Syne3Q4FZC9 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Syne3Q4FZC9 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Syne3Q4FZC9 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Syne3Q4FZC9 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Syne3Q4FZC9 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Syne3Q4FZC9 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Syne3Q4FZC9 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Syne3Q4FZC9 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Syne3Q4FZC9 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Syne3Q4FZC9 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Syne3Q4FZC9 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Syne3Q4FZC9 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Syne3Q4FZC9 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Syne3Q4FZC9 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Syne3Q4FZC9 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Syne3Q4FZC9 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Syne3Q4FZC9 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC13.25□□□□□ -0.29
Syne3Q4FZC9 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Syne3Q4FZC9 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Syne3Q4FZC9 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Syne3Q4FZC9 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Syne3Q4FZC9 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Syne3Q4FZC9 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Syne3Q4FZC9 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Syne3Q4FZC9 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Syne3Q4FZC9 Gm25261-201ENSMUST00000157416 134 ntBASIC13.25□□□□□ -0.29
Syne3Q4FZC9 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Syne3Q4FZC9 Gm6652-201ENSMUST00000186414 1070 ntBASIC13.25□□□□□ -0.29
Syne3Q4FZC9 Gm5904-201ENSMUST00000210286 865 ntBASIC13.25□□□□□ -0.29
Syne3Q4FZC9 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Syne3Q4FZC9 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Syne3Q4FZC9 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Syne3Q4FZC9 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Syne3Q4FZC9 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Syne3Q4FZC9 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Syne3Q4FZC9 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Syne3Q4FZC9 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Syne3Q4FZC9 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Syne3Q4FZC9 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Syne3Q4FZC9 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Syne3Q4FZC9 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Syne3Q4FZC9 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Syne3Q4FZC9 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Syne3Q4FZC9 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Syne3Q4FZC9 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Syne3Q4FZC9 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Syne3Q4FZC9 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Syne3Q4FZC9 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Syne3Q4FZC9 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Syne3Q4FZC9 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Syne3Q4FZC9 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Syne3Q4FZC9 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Syne3Q4FZC9 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Syne3Q4FZC9 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Syne3Q4FZC9 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Syne3Q4FZC9 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Syne3Q4FZC9 Gm11591-201ENSMUST00000120063 702 ntBASIC13.24□□□□□ -0.29
Syne3Q4FZC9 Gm12502-201ENSMUST00000120197 444 ntBASIC13.24□□□□□ -0.29
Syne3Q4FZC9 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Syne3Q4FZC9 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Syne3Q4FZC9 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Syne3Q4FZC9 Gm45880-201ENSMUST00000213041 853 ntBASIC13.24□□□□□ -0.29
Syne3Q4FZC9 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC13.24□□□□□ -0.29
Syne3Q4FZC9 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms