Protein–RNA interactions for Protein: Q3US59

Gm28047, Predicted gene, 28047, mousemouse

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28047Q3US59 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
Gm28047Q3US59 Gm16379-201ENSMUST00000161469 348 ntBASIC14.17□□□□□ -0.14
Gm28047Q3US59 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm28047Q3US59 Gm8762-201ENSMUST00000193486 339 ntBASIC14.17□□□□□ -0.14
Gm28047Q3US59 Gm5781-201ENSMUST00000219792 443 ntBASIC14.17□□□□□ -0.14
Gm28047Q3US59 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm28047Q3US59 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
Gm28047Q3US59 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm28047Q3US59 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm28047Q3US59 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm28047Q3US59 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Gm28047Q3US59 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Gm28047Q3US59 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Gm28047Q3US59 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm28047Q3US59 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm28047Q3US59 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Gm28047Q3US59 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Gm28047Q3US59 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Gm28047Q3US59 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm28047Q3US59 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Gm28047Q3US59 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm28047Q3US59 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Gm28047Q3US59 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm28047Q3US59 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm28047Q3US59 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC14.16□□□□□ -0.14
Gm28047Q3US59 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm28047Q3US59 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Gm28047Q3US59 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Gm28047Q3US59 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Gm28047Q3US59 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm28047Q3US59 Gm9083-201ENSMUST00000120423 819 ntBASIC14.16□□□□□ -0.14
Gm28047Q3US59 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Gm28047Q3US59 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC14.16□□□□□ -0.14
Gm28047Q3US59 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Gm28047Q3US59 Gm24548-201ENSMUST00000158650 108 ntBASIC14.16□□□□□ -0.14
Gm28047Q3US59 Gm27731-201ENSMUST00000185192 107 ntBASIC14.16□□□□□ -0.14
Gm28047Q3US59 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Gm28047Q3US59 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC14.16□□□□□ -0.14
Gm28047Q3US59 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm28047Q3US59 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Gm28047Q3US59 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm28047Q3US59 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Gm28047Q3US59 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC14.16□□□□□ -0.14
Gm28047Q3US59 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm28047Q3US59 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm28047Q3US59 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm28047Q3US59 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC14.16□□□□□ -0.14
Gm28047Q3US59 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Gm28047Q3US59 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm28047Q3US59 CT025624.1-201ENSMUST00000224007 2700 ntBASIC14.16□□□□□ -0.14
Gm28047Q3US59 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm28047Q3US59 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Gm28047Q3US59 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm28047Q3US59 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm28047Q3US59 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm28047Q3US59 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm28047Q3US59 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm28047Q3US59 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm28047Q3US59 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Gm28047Q3US59 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm28047Q3US59 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm28047Q3US59 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm28047Q3US59 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Gm28047Q3US59 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm28047Q3US59 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Gm28047Q3US59 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Gm28047Q3US59 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm28047Q3US59 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm28047Q3US59 Gm45342-201ENSMUST00000210903 1363 ntBASIC14.15□□□□□ -0.14
Gm28047Q3US59 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC14.15□□□□□ -0.14
Gm28047Q3US59 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm28047Q3US59 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC14.15□□□□□ -0.14
Gm28047Q3US59 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Gm28047Q3US59 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Gm28047Q3US59 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC14.15□□□□□ -0.14
Gm28047Q3US59 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC14.15□□□□□ -0.14
Gm28047Q3US59 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm28047Q3US59 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm28047Q3US59 AC156031.2-201ENSMUST00000213107 3310 ntBASIC14.15□□□□□ -0.14
Gm28047Q3US59 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm28047Q3US59 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm28047Q3US59 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Gm28047Q3US59 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm28047Q3US59 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Gm28047Q3US59 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm28047Q3US59 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm28047Q3US59 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Gm28047Q3US59 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm28047Q3US59 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Gm28047Q3US59 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.15
Gm28047Q3US59 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm28047Q3US59 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm28047Q3US59 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Gm28047Q3US59 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm28047Q3US59 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm28047Q3US59 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm28047Q3US59 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
Gm28047Q3US59 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm28047Q3US59 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Gm28047Q3US59 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms