Protein–RNA interactions for Protein: Q3TYX8

Rufy4, RUN and FYVE domain-containing protein 4, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rufy4Q3TYX8 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rufy4Q3TYX8 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Rufy4Q3TYX8 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Rufy4Q3TYX8 Gm42480-201ENSMUST00000198434 2595 ntBASIC13.73□□□□□ -0.21
Rufy4Q3TYX8 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Rufy4Q3TYX8 Gm9083-201ENSMUST00000120423 819 ntBASIC13.73□□□□□ -0.21
Rufy4Q3TYX8 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC13.73□□□□□ -0.21
Rufy4Q3TYX8 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC13.73□□□□□ -0.21
Rufy4Q3TYX8 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC13.73□□□□□ -0.21
Rufy4Q3TYX8 Gm8856-201ENSMUST00000185254 1144 ntBASIC13.73□□□□□ -0.21
Rufy4Q3TYX8 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC13.73□□□□□ -0.21
Rufy4Q3TYX8 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Rufy4Q3TYX8 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Rufy4Q3TYX8 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC13.73□□□□□ -0.21
Rufy4Q3TYX8 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Rufy4Q3TYX8 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC13.73□□□□□ -0.21
Rufy4Q3TYX8 CT030182.1-201ENSMUST00000225935 533 ntBASIC13.73□□□□□ -0.21
Rufy4Q3TYX8 Gm10371-202ENSMUST00000228010 1081 ntBASIC13.73□□□□□ -0.21
Rufy4Q3TYX8 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rufy4Q3TYX8 Gm10312-201ENSMUST00000078515 489 ntBASIC13.73□□□□□ -0.21
Rufy4Q3TYX8 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Rufy4Q3TYX8 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rufy4Q3TYX8 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Rufy4Q3TYX8 Gm26616-202ENSMUST00000195676 3107 ntBASIC13.73□□□□□ -0.21
Rufy4Q3TYX8 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rufy4Q3TYX8 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rufy4Q3TYX8 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rufy4Q3TYX8 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rufy4Q3TYX8 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rufy4Q3TYX8 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rufy4Q3TYX8 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rufy4Q3TYX8 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rufy4Q3TYX8 Gm7993-201ENSMUST00000200970 1384 ntBASIC13.72□□□□□ -0.21
Rufy4Q3TYX8 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rufy4Q3TYX8 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
Rufy4Q3TYX8 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rufy4Q3TYX8 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rufy4Q3TYX8 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rufy4Q3TYX8 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC13.72□□□□□ -0.21
Rufy4Q3TYX8 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rufy4Q3TYX8 AC125108.1-201ENSMUST00000218986 2330 ntBASIC13.72□□□□□ -0.21
Rufy4Q3TYX8 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Rufy4Q3TYX8 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC13.72□□□□□ -0.21
Rufy4Q3TYX8 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Rufy4Q3TYX8 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC13.72□□□□□ -0.21
Rufy4Q3TYX8 Gm6963-201ENSMUST00000147879 379 ntBASIC13.72□□□□□ -0.21
Rufy4Q3TYX8 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC13.72□□□□□ -0.21
Rufy4Q3TYX8 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rufy4Q3TYX8 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC13.72□□□□□ -0.21
Rufy4Q3TYX8 Gm5070-201ENSMUST00000177599 862 ntBASIC13.72□□□□□ -0.21
Rufy4Q3TYX8 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rufy4Q3TYX8 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rufy4Q3TYX8 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rufy4Q3TYX8 Gm43908-201ENSMUST00000205074 1472 ntBASIC13.72□□□□□ -0.21
Rufy4Q3TYX8 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rufy4Q3TYX8 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rufy4Q3TYX8 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rufy4Q3TYX8 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Rufy4Q3TYX8 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rufy4Q3TYX8 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC13.72□□□□□ -0.21
Rufy4Q3TYX8 Gm18626-201ENSMUST00000221512 1409 ntBASIC13.72□□□□□ -0.21
Rufy4Q3TYX8 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rufy4Q3TYX8 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rufy4Q3TYX8 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rufy4Q3TYX8 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rufy4Q3TYX8 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Rufy4Q3TYX8 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rufy4Q3TYX8 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rufy4Q3TYX8 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Rufy4Q3TYX8 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
Rufy4Q3TYX8 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Rufy4Q3TYX8 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Rufy4Q3TYX8 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rufy4Q3TYX8 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Rufy4Q3TYX8 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rufy4Q3TYX8 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Rufy4Q3TYX8 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Rufy4Q3TYX8 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC13.71□□□□□ -0.21
Rufy4Q3TYX8 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rufy4Q3TYX8 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC13.71□□□□□ -0.21
Rufy4Q3TYX8 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC13.71□□□□□ -0.21
Rufy4Q3TYX8 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC13.71□□□□□ -0.21
Rufy4Q3TYX8 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC13.71□□□□□ -0.21
Rufy4Q3TYX8 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC13.71□□□□□ -0.21
Rufy4Q3TYX8 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Rufy4Q3TYX8 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rufy4Q3TYX8 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC13.71□□□□□ -0.21
Rufy4Q3TYX8 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rufy4Q3TYX8 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC13.71□□□□□ -0.21
Rufy4Q3TYX8 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Rufy4Q3TYX8 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rufy4Q3TYX8 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rufy4Q3TYX8 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rufy4Q3TYX8 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Rufy4Q3TYX8 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Rufy4Q3TYX8 Gm27196-201ENSMUST00000184787 2582 ntBASIC13.71□□□□□ -0.22
Rufy4Q3TYX8 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Rufy4Q3TYX8 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC13.71□□□□□ -0.22
Rufy4Q3TYX8 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Rufy4Q3TYX8 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms