Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Gm12384-201ENSMUST00000119228 919 ntBASIC13.22□□□□□ -0.29
Trim43aQ3TL54 Gm13123-201ENSMUST00000122173 492 ntBASIC13.22□□□□□ -0.29
Trim43aQ3TL54 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC13.22□□□□□ -0.29
Trim43aQ3TL54 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Trim43aQ3TL54 Gm16296-201ENSMUST00000159905 325 ntBASIC13.22□□□□□ -0.29
Trim43aQ3TL54 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim43aQ3TL54 Gm17150-201ENSMUST00000165577 381 ntBASIC13.22□□□□□ -0.29
Trim43aQ3TL54 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC13.22□□□□□ -0.29
Trim43aQ3TL54 Gm6244-201ENSMUST00000178732 841 ntBASIC13.22□□□□□ -0.29
Trim43aQ3TL54 Gm6652-201ENSMUST00000186414 1070 ntBASIC13.22□□□□□ -0.29
Trim43aQ3TL54 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC13.22□□□□□ -0.29
Trim43aQ3TL54 AC130829.1-201ENSMUST00000221548 494 ntBASIC13.22□□□□□ -0.29
Trim43aQ3TL54 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim43aQ3TL54 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Trim43aQ3TL54 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim43aQ3TL54 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim43aQ3TL54 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Trim43aQ3TL54 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim43aQ3TL54 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim43aQ3TL54 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Trim43aQ3TL54 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim43aQ3TL54 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim43aQ3TL54 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim43aQ3TL54 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Trim43aQ3TL54 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trim43aQ3TL54 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim43aQ3TL54 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim43aQ3TL54 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim43aQ3TL54 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim43aQ3TL54 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC13.21□□□□□ -0.29
Trim43aQ3TL54 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim43aQ3TL54 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim43aQ3TL54 Gm14608-201ENSMUST00000120030 1553 ntBASIC13.21□□□□□ -0.29
Trim43aQ3TL54 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trim43aQ3TL54 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim43aQ3TL54 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim43aQ3TL54 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim43aQ3TL54 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Trim43aQ3TL54 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim43aQ3TL54 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim43aQ3TL54 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Trim43aQ3TL54 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC13.21□□□□□ -0.29
Trim43aQ3TL54 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC13.21□□□□□ -0.29
Trim43aQ3TL54 Gm8602-201ENSMUST00000184045 607 ntBASIC13.21□□□□□ -0.29
Trim43aQ3TL54 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC13.21□□□□□ -0.29
Trim43aQ3TL54 AC165260.3-202ENSMUST00000224550 1031 ntBASIC13.21□□□□□ -0.29
Trim43aQ3TL54 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim43aQ3TL54 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim43aQ3TL54 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trim43aQ3TL54 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Trim43aQ3TL54 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trim43aQ3TL54 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Trim43aQ3TL54 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trim43aQ3TL54 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Trim43aQ3TL54 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trim43aQ3TL54 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trim43aQ3TL54 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trim43aQ3TL54 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trim43aQ3TL54 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trim43aQ3TL54 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim43aQ3TL54 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim43aQ3TL54 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim43aQ3TL54 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim43aQ3TL54 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim43aQ3TL54 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trim43aQ3TL54 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim43aQ3TL54 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim43aQ3TL54 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim43aQ3TL54 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC13.2□□□□□ -0.3
Trim43aQ3TL54 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC13.2□□□□□ -0.3
Trim43aQ3TL54 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim43aQ3TL54 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim43aQ3TL54 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim43aQ3TL54 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC13.2□□□□□ -0.3
Trim43aQ3TL54 Gm27486-201ENSMUST00000184923 80 ntBASIC13.2□□□□□ -0.3
Trim43aQ3TL54 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC13.2□□□□□ -0.3
Trim43aQ3TL54 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC13.2□□□□□ -0.3
Trim43aQ3TL54 Gm2495-201ENSMUST00000191160 466 ntBASIC13.2□□□□□ -0.3
Trim43aQ3TL54 Gm7287-201ENSMUST00000205267 602 ntBASIC13.2□□□□□ -0.3
Trim43aQ3TL54 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
Trim43aQ3TL54 Gm5035-201ENSMUST00000215581 927 ntBASIC13.2□□□□□ -0.3
Trim43aQ3TL54 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC13.2□□□□□ -0.3
Trim43aQ3TL54 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim43aQ3TL54 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Trim43aQ3TL54 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim43aQ3TL54 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim43aQ3TL54 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim43aQ3TL54 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
Trim43aQ3TL54 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim43aQ3TL54 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim43aQ3TL54 Gm2238-201ENSMUST00000192074 3669 ntBASIC13.2□□□□□ -0.3
Trim43aQ3TL54 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC13.2□□□□□ -0.3
Trim43aQ3TL54 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC13.2□□□□□ -0.3
Trim43aQ3TL54 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim43aQ3TL54 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim43aQ3TL54 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim43aQ3TL54 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim43aQ3TL54 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC13.2□□□□□ -0.3
Trim43aQ3TL54 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim43aQ3TL54 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms