Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Q3KNL4 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Q3KNL4 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Q3KNL4 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Q3KNL4 Gm22331-201ENSMUST00000158066 136 ntBASIC12.24□□□□□ -0.45
Q3KNL4 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Q3KNL4 Gm9002-201ENSMUST00000178437 499 ntBASIC12.24□□□□□ -0.45
Q3KNL4 Gm8652-201ENSMUST00000181363 964 ntBASIC12.24□□□□□ -0.45
Q3KNL4 Gm45059-201ENSMUST00000205558 1077 ntBASIC12.24□□□□□ -0.45
Q3KNL4 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.24□□□□□ -0.45
Q3KNL4 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Q3KNL4 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Q3KNL4 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Q3KNL4 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Q3KNL4 Gm19163-201ENSMUST00000223313 780 ntBASIC12.24□□□□□ -0.45
Q3KNL4 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Q3KNL4 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Q3KNL4 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Q3KNL4 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Q3KNL4 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Q3KNL4 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Q3KNL4 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Q3KNL4 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Q3KNL4 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Q3KNL4 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Q3KNL4 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Q3KNL4 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Q3KNL4 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Q3KNL4 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Q3KNL4 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Q3KNL4 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Q3KNL4 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Q3KNL4 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Q3KNL4 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Q3KNL4 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Q3KNL4 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Q3KNL4 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Q3KNL4 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Q3KNL4 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Q3KNL4 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Q3KNL4 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Q3KNL4 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Q3KNL4 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.23□□□□□ -0.45
Q3KNL4 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Q3KNL4 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Q3KNL4 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.23□□□□□ -0.45
Q3KNL4 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.23□□□□□ -0.45
Q3KNL4 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Q3KNL4 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC12.23□□□□□ -0.45
Q3KNL4 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Q3KNL4 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Q3KNL4 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.23□□□□□ -0.45
Q3KNL4 Gm11814-201ENSMUST00000119515 929 ntBASIC12.23□□□□□ -0.45
Q3KNL4 Gm12138-201ENSMUST00000122180 951 ntBASIC12.23□□□□□ -0.45
Q3KNL4 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC12.23□□□□□ -0.45
Q3KNL4 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.23□□□□□ -0.45
Q3KNL4 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.23□□□□□ -0.45
Q3KNL4 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Q3KNL4 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.23□□□□□ -0.45
Q3KNL4 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.23□□□□□ -0.45
Q3KNL4 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.23□□□□□ -0.45
Q3KNL4 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Q3KNL4 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Q3KNL4 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.23□□□□□ -0.45
Q3KNL4 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Q3KNL4 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.23□□□□□ -0.45
Q3KNL4 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Q3KNL4 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Q3KNL4 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Q3KNL4 Dopey2-207ENSMUST00000227156 7340 ntBASIC12.23□□□□□ -0.45
Q3KNL4 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC12.23□□□□□ -0.45
Q3KNL4 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Q3KNL4 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.23□□□□□ -0.45
Q3KNL4 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Q3KNL4 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Q3KNL4 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Q3KNL4 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Q3KNL4 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
Q3KNL4 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Q3KNL4 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Q3KNL4 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Q3KNL4 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC12.22□□□□□ -0.45
Q3KNL4 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.22□□□□□ -0.45
Q3KNL4 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Q3KNL4 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Q3KNL4 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Q3KNL4 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Q3KNL4 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.22□□□□□ -0.45
Q3KNL4 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Q3KNL4 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Q3KNL4 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Q3KNL4 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC12.22□□□□□ -0.45
Q3KNL4 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Q3KNL4 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Q3KNL4 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Q3KNL4 Gm15806-201ENSMUST00000120696 955 ntBASIC12.22□□□□□ -0.45
Q3KNL4 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC12.22□□□□□ -0.45
Q3KNL4 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Q3KNL4 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Q3KNL4 Gm24196-201ENSMUST00000179161 110 ntBASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms