Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col9a2Q07643 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Col9a2Q07643 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col9a2Q07643 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Col9a2Q07643 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC13.48□□□□□ -0.25
Col9a2Q07643 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col9a2Q07643 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col9a2Q07643 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col9a2Q07643 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Col9a2Q07643 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Col9a2Q07643 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC13.48□□□□□ -0.25
Col9a2Q07643 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Col9a2Q07643 Gm12566-201ENSMUST00000121479 359 ntBASIC13.48□□□□□ -0.25
Col9a2Q07643 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC13.48□□□□□ -0.25
Col9a2Q07643 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC13.48□□□□□ -0.25
Col9a2Q07643 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC13.48□□□□□ -0.25
Col9a2Q07643 Gm23699-201ENSMUST00000158835 135 ntBASIC13.48□□□□□ -0.25
Col9a2Q07643 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Col9a2Q07643 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Col9a2Q07643 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC13.48□□□□□ -0.25
Col9a2Q07643 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col9a2Q07643 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col9a2Q07643 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Col9a2Q07643 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Col9a2Q07643 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col9a2Q07643 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col9a2Q07643 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Col9a2Q07643 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Col9a2Q07643 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col9a2Q07643 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Col9a2Q07643 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col9a2Q07643 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col9a2Q07643 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Col9a2Q07643 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col9a2Q07643 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC13.47□□□□□ -0.25
Col9a2Q07643 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col9a2Q07643 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col9a2Q07643 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Col9a2Q07643 Gm5525-201ENSMUST00000190438 1312 ntBASIC13.47□□□□□ -0.25
Col9a2Q07643 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col9a2Q07643 Gm11989-201ENSMUST00000117240 672 ntBASIC13.47□□□□□ -0.25
Col9a2Q07643 Gm15515-201ENSMUST00000117827 822 ntBASIC13.47□□□□□ -0.25
Col9a2Q07643 Gm11362-201ENSMUST00000118838 850 ntBASIC13.47□□□□□ -0.25
Col9a2Q07643 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC13.47□□□□□ -0.25
Col9a2Q07643 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC13.47□□□□□ -0.25
Col9a2Q07643 Gm42997-202ENSMUST00000200321 985 ntBASIC13.47□□□□□ -0.25
Col9a2Q07643 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC13.47□□□□□ -0.25
Col9a2Q07643 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Col9a2Q07643 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col9a2Q07643 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Col9a2Q07643 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col9a2Q07643 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col9a2Q07643 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Col9a2Q07643 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Col9a2Q07643 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Col9a2Q07643 Adra1a-206ENSMUST00000225182 2337 ntBASIC13.47□□□□□ -0.25
Col9a2Q07643 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col9a2Q07643 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Col9a2Q07643 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col9a2Q07643 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col9a2Q07643 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col9a2Q07643 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Col9a2Q07643 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col9a2Q07643 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC13.47□□□□□ -0.25
Col9a2Q07643 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC13.47□□□□□ -0.25
Col9a2Q07643 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col9a2Q07643 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Col9a2Q07643 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Col9a2Q07643 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13.46□□□□□ -0.25
Col9a2Q07643 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col9a2Q07643 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Col9a2Q07643 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col9a2Q07643 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Col9a2Q07643 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Col9a2Q07643 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Col9a2Q07643 Gm23949-201ENSMUST00000104027 127 ntBASIC13.46□□□□□ -0.25
Col9a2Q07643 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Col9a2Q07643 Gm12164-201ENSMUST00000121695 551 ntBASIC13.46□□□□□ -0.25
Col9a2Q07643 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Col9a2Q07643 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col9a2Q07643 AC153954.1-201ENSMUST00000216959 255 ntBASIC13.46□□□□□ -0.25
Col9a2Q07643 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col9a2Q07643 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col9a2Q07643 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col9a2Q07643 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col9a2Q07643 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Col9a2Q07643 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Col9a2Q07643 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Col9a2Q07643 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Col9a2Q07643 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Col9a2Q07643 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Col9a2Q07643 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
Col9a2Q07643 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Col9a2Q07643 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Col9a2Q07643 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col9a2Q07643 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col9a2Q07643 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col9a2Q07643 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Col9a2Q07643 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC13.45□□□□□ -0.26
Col9a2Q07643 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms