Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Pfdn6Q03958 Gm5620-201ENSMUST00000077991 1348 ntBASIC12.55□□□□□ -0.4
Pfdn6Q03958 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
Pfdn6Q03958 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pfdn6Q03958 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pfdn6Q03958 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pfdn6Q03958 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pfdn6Q03958 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pfdn6Q03958 AC127597.1-201ENSMUST00000225697 5711 ntBASIC12.55□□□□□ -0.4
Pfdn6Q03958 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.54□□□□□ -0.4
Pfdn6Q03958 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pfdn6Q03958 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pfdn6Q03958 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pfdn6Q03958 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
Pfdn6Q03958 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pfdn6Q03958 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pfdn6Q03958 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pfdn6Q03958 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pfdn6Q03958 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pfdn6Q03958 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pfdn6Q03958 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pfdn6Q03958 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pfdn6Q03958 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pfdn6Q03958 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Pfdn6Q03958 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pfdn6Q03958 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.54□□□□□ -0.4
Pfdn6Q03958 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pfdn6Q03958 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pfdn6Q03958 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pfdn6Q03958 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pfdn6Q03958 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Pfdn6Q03958 Gm15703-201ENSMUST00000120250 880 ntBASIC12.54□□□□□ -0.4
Pfdn6Q03958 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.54□□□□□ -0.4
Pfdn6Q03958 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Pfdn6Q03958 Rmrp-201ENSMUST00000157463 271 ntBASIC12.54□□□□□ -0.4
Pfdn6Q03958 Gm16296-201ENSMUST00000159905 325 ntBASIC12.54□□□□□ -0.4
Pfdn6Q03958 Gm27682-201ENSMUST00000183930 110 ntBASIC12.54□□□□□ -0.4
Pfdn6Q03958 Gm18584-201ENSMUST00000203098 964 ntBASIC12.54□□□□□ -0.4
Pfdn6Q03958 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.54□□□□□ -0.4
Pfdn6Q03958 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12.54□□□□□ -0.4
Pfdn6Q03958 Gm32025-201ENSMUST00000217960 307 ntBASIC12.54□□□□□ -0.4
Pfdn6Q03958 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.54□□□□□ -0.4
Pfdn6Q03958 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.54□□□□□ -0.4
Pfdn6Q03958 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pfdn6Q03958 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pfdn6Q03958 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pfdn6Q03958 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Pfdn6Q03958 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pfdn6Q03958 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Pfdn6Q03958 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pfdn6Q03958 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC12.54□□□□□ -0.4
Pfdn6Q03958 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pfdn6Q03958 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pfdn6Q03958 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pfdn6Q03958 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pfdn6Q03958 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pfdn6Q03958 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.54□□□□□ -0.4
Pfdn6Q03958 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pfdn6Q03958 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pfdn6Q03958 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pfdn6Q03958 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Pfdn6Q03958 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Pfdn6Q03958 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pfdn6Q03958 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pfdn6Q03958 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.53□□□□□ -0.4
Pfdn6Q03958 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pfdn6Q03958 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Pfdn6Q03958 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pfdn6Q03958 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pfdn6Q03958 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.53□□□□□ -0.4
Pfdn6Q03958 Gm16379-201ENSMUST00000161469 348 ntBASIC12.53□□□□□ -0.4
Pfdn6Q03958 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pfdn6Q03958 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.53□□□□□ -0.4
Pfdn6Q03958 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Pfdn6Q03958 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pfdn6Q03958 Gm8762-201ENSMUST00000193486 339 ntBASIC12.53□□□□□ -0.4
Pfdn6Q03958 Gm19184-201ENSMUST00000196798 928 ntBASIC12.53□□□□□ -0.4
Pfdn6Q03958 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.53□□□□□ -0.4
Pfdn6Q03958 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.53□□□□□ -0.4
Pfdn6Q03958 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.53□□□□□ -0.4
Pfdn6Q03958 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC12.53□□□□□ -0.4
Pfdn6Q03958 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pfdn6Q03958 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pfdn6Q03958 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pfdn6Q03958 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Pfdn6Q03958 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pfdn6Q03958 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.53□□□□□ -0.4
Pfdn6Q03958 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pfdn6Q03958 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC12.53□□□□□ -0.4
Pfdn6Q03958 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pfdn6Q03958 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pfdn6Q03958 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pfdn6Q03958 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pfdn6Q03958 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pfdn6Q03958 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Pfdn6Q03958 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pfdn6Q03958 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.53□□□□□ -0.4
Pfdn6Q03958 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pfdn6Q03958 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Pfdn6Q03958 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms