Protein–RNA interactions for Protein: P97929

Brca2, Breast cancer type 2 susceptibility protein homolog, mousemouse

Predictions only

Length 3,329 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca2P97929 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Brca2P97929 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Brca2P97929 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Brca2P97929 Gm5421-201ENSMUST00000181698 2354 ntBASIC11.69□□□□□ -0.54
Brca2P97929 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC11.69□□□□□ -0.54
Brca2P97929 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Brca2P97929 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Brca2P97929 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Brca2P97929 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Brca2P97929 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
Brca2P97929 Gm23272-201ENSMUST00000104053 129 ntBASIC11.69□□□□□ -0.54
Brca2P97929 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Brca2P97929 Gm22388-201ENSMUST00000158194 248 ntBASIC11.69□□□□□ -0.54
Brca2P97929 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC11.69□□□□□ -0.54
Brca2P97929 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC11.69□□□□□ -0.54
Brca2P97929 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC11.69□□□□□ -0.54
Brca2P97929 Mcpt4-201ENSMUST00000043249 1108 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Brca2P97929 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Brca2P97929 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Brca2P97929 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Brca2P97929 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.69□□□□□ -0.54
Brca2P97929 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC11.69□□□□□ -0.54
Brca2P97929 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Brca2P97929 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Brca2P97929 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Brca2P97929 Gm8038-201ENSMUST00000164674 2044 ntBASIC11.69□□□□□ -0.54
Brca2P97929 Ighv1-50-201ENSMUST00000103521 390 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Brca2P97929 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Brca2P97929 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Brca2P97929 AA623943-201ENSMUST00000121794 354 ntBASIC11.69□□□□□ -0.54
Brca2P97929 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC11.69□□□□□ -0.54
Brca2P97929 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Brca2P97929 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC11.69□□□□□ -0.54
Brca2P97929 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC11.69□□□□□ -0.54
Brca2P97929 Gm12407-201ENSMUST00000180219 324 ntBASIC11.69□□□□□ -0.54
Brca2P97929 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Brca2P97929 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Brca2P97929 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Brca2P97929 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Brca2P97929 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Brca2P97929 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Brca2P97929 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Brca2P97929 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Brca2P97929 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Brca2P97929 Gm44260-201ENSMUST00000204946 2094 ntBASIC11.68□□□□□ -0.54
Brca2P97929 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Brca2P97929 Gm25053-201ENSMUST00000103982 133 ntBASIC11.68□□□□□ -0.54
Brca2P97929 Gm25922-201ENSMUST00000104281 130 ntBASIC11.68□□□□□ -0.54
Brca2P97929 Gm12337-201ENSMUST00000119634 400 ntBASIC11.68□□□□□ -0.54
Brca2P97929 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Brca2P97929 Gm24679-201ENSMUST00000158762 111 ntBASIC11.68□□□□□ -0.54
Brca2P97929 Mir7221-201ENSMUST00000184009 72 ntBASIC11.68□□□□□ -0.54
Brca2P97929 Gm25053-202ENSMUST00000199731 132 ntBASIC11.68□□□□□ -0.54
Brca2P97929 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC11.68□□□□□ -0.54
Brca2P97929 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Brca2P97929 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Brca2P97929 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Brca2P97929 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Brca2P97929 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Brca2P97929 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC11.68□□□□□ -0.54
Brca2P97929 Triml2-201ENSMUST00000163869 1467 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Brca2P97929 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Brca2P97929 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Brca2P97929 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Brca2P97929 Gm11663-201ENSMUST00000117888 290 ntBASIC11.68□□□□□ -0.54
Brca2P97929 Gm8731-201ENSMUST00000118088 412 ntBASIC11.68□□□□□ -0.54
Brca2P97929 Gm11500-201ENSMUST00000118237 601 ntBASIC11.68□□□□□ -0.54
Brca2P97929 Gm12453-201ENSMUST00000121981 331 ntBASIC11.68□□□□□ -0.54
Brca2P97929 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC11.68□□□□□ -0.54
Brca2P97929 Gm8824-201ENSMUST00000182962 990 ntBASIC11.68□□□□□ -0.54
Brca2P97929 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC11.68□□□□□ -0.54
Brca2P97929 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Brca2P97929 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Brca2P97929 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Brca2P97929 Gm12474-201ENSMUST00000122898 1410 ntTSL 2 BASIC11.68□□□□□ -0.54
Brca2P97929 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Brca2P97929 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Brca2P97929 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Brca2P97929 Gm44942-201ENSMUST00000096093 2072 ntBASIC11.68□□□□□ -0.54
Brca2P97929 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Brca2P97929 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Brca2P97929 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Brca2P97929 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Brca2P97929 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Brca2P97929 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC11.68□□□□□ -0.54
Brca2P97929 Gm11619-201ENSMUST00000117474 237 ntBASIC11.68□□□□□ -0.54
Brca2P97929 0610037L13Rik-206ENSMUST00000120473 835 ntTSL 2 BASIC11.68□□□□□ -0.54
Brca2P97929 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC11.68□□□□□ -0.54
Brca2P97929 BC106175-202ENSMUST00000219344 1213 ntBASIC11.68□□□□□ -0.54
Brca2P97929 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Brca2P97929 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Brca2P97929 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Brca2P97929 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Brca2P97929 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC11.67□□□□□ -0.54
Brca2P97929 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Brca2P97929 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC11.67□□□□□ -0.54
Brca2P97929 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Brca2P97929 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Brca2P97929 Ighv1-5-201ENSMUST00000103494 294 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Brca2P97929 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms