Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Thumpd3P97770 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Thumpd3P97770 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Thumpd3P97770 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Thumpd3P97770 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Thumpd3P97770 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Thumpd3P97770 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Thumpd3P97770 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Thumpd3P97770 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Thumpd3P97770 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Thumpd3P97770 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Thumpd3P97770 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.7□□□□□ -0.38
Thumpd3P97770 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Thumpd3P97770 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Thumpd3P97770 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Thumpd3P97770 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
Thumpd3P97770 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Thumpd3P97770 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Thumpd3P97770 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Thumpd3P97770 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Thumpd3P97770 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Thumpd3P97770 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Thumpd3P97770 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Thumpd3P97770 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Thumpd3P97770 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.69□□□□□ -0.38
Thumpd3P97770 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Thumpd3P97770 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Thumpd3P97770 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.69□□□□□ -0.38
Thumpd3P97770 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Thumpd3P97770 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Thumpd3P97770 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Thumpd3P97770 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Thumpd3P97770 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Thumpd3P97770 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.69□□□□□ -0.38
Thumpd3P97770 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Thumpd3P97770 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC12.69□□□□□ -0.38
Thumpd3P97770 Gm12203-201ENSMUST00000118235 598 ntBASIC12.69□□□□□ -0.38
Thumpd3P97770 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.69□□□□□ -0.38
Thumpd3P97770 Gm12209-201ENSMUST00000120089 596 ntBASIC12.69□□□□□ -0.38
Thumpd3P97770 Gm16177-201ENSMUST00000120728 718 ntBASIC12.69□□□□□ -0.38
Thumpd3P97770 Gm10156-201ENSMUST00000122364 462 ntBASIC12.69□□□□□ -0.38
Thumpd3P97770 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Thumpd3P97770 Gm27331-201ENSMUST00000183705 60 ntBASIC12.69□□□□□ -0.38
Thumpd3P97770 Gm38319-201ENSMUST00000194537 1266 ntBASIC12.69□□□□□ -0.38
Thumpd3P97770 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Thumpd3P97770 Gm44069-201ENSMUST00000204898 506 ntBASIC12.69□□□□□ -0.38
Thumpd3P97770 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Thumpd3P97770 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Thumpd3P97770 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.69□□□□□ -0.38
Thumpd3P97770 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.69□□□□□ -0.38
Thumpd3P97770 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Thumpd3P97770 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Thumpd3P97770 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Thumpd3P97770 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC12.69□□□□□ -0.38
Thumpd3P97770 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Thumpd3P97770 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Thumpd3P97770 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Thumpd3P97770 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Thumpd3P97770 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Thumpd3P97770 Gm12846-201ENSMUST00000120431 1373 ntBASIC12.69□□□□□ -0.38
Thumpd3P97770 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Thumpd3P97770 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Thumpd3P97770 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.68□□□□□ -0.38
Thumpd3P97770 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Thumpd3P97770 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Thumpd3P97770 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Thumpd3P97770 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Thumpd3P97770 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Thumpd3P97770 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Thumpd3P97770 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Thumpd3P97770 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Thumpd3P97770 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Thumpd3P97770 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Thumpd3P97770 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
Thumpd3P97770 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Thumpd3P97770 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Thumpd3P97770 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC12.68□□□□□ -0.38
Thumpd3P97770 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Thumpd3P97770 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Thumpd3P97770 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Thumpd3P97770 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
Thumpd3P97770 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
Thumpd3P97770 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Thumpd3P97770 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12.68□□□□□ -0.38
Thumpd3P97770 Gm44064-201ENSMUST00000204964 1087 ntBASIC12.68□□□□□ -0.38
Thumpd3P97770 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC12.68□□□□□ -0.38
Thumpd3P97770 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.68□□□□□ -0.38
Thumpd3P97770 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Thumpd3P97770 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Thumpd3P97770 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Thumpd3P97770 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Thumpd3P97770 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Thumpd3P97770 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Thumpd3P97770 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Thumpd3P97770 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Thumpd3P97770 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Thumpd3P97770 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Thumpd3P97770 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Thumpd3P97770 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Thumpd3P97770 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 96 ms