Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Nkx3-2P97503 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx3-2P97503 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
Nkx3-2P97503 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx3-2P97503 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Nkx3-2P97503 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC11.81□□□□□ -0.52
Nkx3-2P97503 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx3-2P97503 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Nkx3-2P97503 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx3-2P97503 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx3-2P97503 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx3-2P97503 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Nkx3-2P97503 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Nkx3-2P97503 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx3-2P97503 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx3-2P97503 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC11.81□□□□□ -0.52
Nkx3-2P97503 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx3-2P97503 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx3-2P97503 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx3-2P97503 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx3-2P97503 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx3-2P97503 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx3-2P97503 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx3-2P97503 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx3-2P97503 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC11.81□□□□□ -0.52
Nkx3-2P97503 Gm13813-201ENSMUST00000120998 787 ntBASIC11.81□□□□□ -0.52
Nkx3-2P97503 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx3-2P97503 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx3-2P97503 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC11.81□□□□□ -0.52
Nkx3-2P97503 Gm2546-201ENSMUST00000182630 991 ntBASIC11.81□□□□□ -0.52
Nkx3-2P97503 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC11.81□□□□□ -0.52
Nkx3-2P97503 Gm31256-201ENSMUST00000194705 506 ntBASIC11.81□□□□□ -0.52
Nkx3-2P97503 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx3-2P97503 Gm19963-201ENSMUST00000208413 1255 ntBASIC11.81□□□□□ -0.52
Nkx3-2P97503 Gm13097-201ENSMUST00000210722 397 ntBASIC11.81□□□□□ -0.52
Nkx3-2P97503 Gm45925-201ENSMUST00000218882 744 ntBASIC11.81□□□□□ -0.52
Nkx3-2P97503 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx3-2P97503 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx3-2P97503 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx3-2P97503 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx3-2P97503 AC137842.1-201ENSMUST00000227896 2064 ntBASIC11.81□□□□□ -0.52
Nkx3-2P97503 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx3-2P97503 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Nkx3-2P97503 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC11.81□□□□□ -0.52
Nkx3-2P97503 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC11.81□□□□□ -0.52
Nkx3-2P97503 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Nkx3-2P97503 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx3-2P97503 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx3-2P97503 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Nkx3-2P97503 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx3-2P97503 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx3-2P97503 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Nkx3-2P97503 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx3-2P97503 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx3-2P97503 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx3-2P97503 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx3-2P97503 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx3-2P97503 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx3-2P97503 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx3-2P97503 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Nkx3-2P97503 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx3-2P97503 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx3-2P97503 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx3-2P97503 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC11.8□□□□□ -0.52
Nkx3-2P97503 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx3-2P97503 Gm44207-201ENSMUST00000204568 1424 ntBASIC11.8□□□□□ -0.52
Nkx3-2P97503 Gm43051-201ENSMUST00000201096 2678 ntBASIC11.8□□□□□ -0.52
Nkx3-2P97503 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx3-2P97503 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx3-2P97503 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx3-2P97503 Gm11531-201ENSMUST00000117614 555 ntBASIC11.8□□□□□ -0.52
Nkx3-2P97503 Gm13736-201ENSMUST00000119272 253 ntBASIC11.8□□□□□ -0.52
Nkx3-2P97503 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx3-2P97503 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC11.8□□□□□ -0.52
Nkx3-2P97503 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC11.8□□□□□ -0.52
Nkx3-2P97503 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Nkx3-2P97503 Gm8018-201ENSMUST00000173536 789 ntBASIC11.8□□□□□ -0.52
Nkx3-2P97503 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx3-2P97503 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Nkx3-2P97503 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC11.8□□□□□ -0.52
Nkx3-2P97503 CT485787.1-201ENSMUST00000225617 968 ntBASIC11.8□□□□□ -0.52
Nkx3-2P97503 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx3-2P97503 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Nkx3-2P97503 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx3-2P97503 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Nkx3-2P97503 Gm22058-201ENSMUST00000083393 310 ntBASIC11.8□□□□□ -0.52
Nkx3-2P97503 Gm44401-201ENSMUST00000204462 2375 ntBASIC11.8□□□□□ -0.52
Nkx3-2P97503 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx3-2P97503 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx3-2P97503 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx3-2P97503 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx3-2P97503 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx3-2P97503 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx3-2P97503 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx3-2P97503 Gm37827-201ENSMUST00000194486 1542 ntBASIC11.8□□□□□ -0.52
Nkx3-2P97503 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
Nkx3-2P97503 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx3-2P97503 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx3-2P97503 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nkx3-2P97503 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms