Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Npas1P97459 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Npas1P97459 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Npas1P97459 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Npas1P97459 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Npas1P97459 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Npas1P97459 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Npas1P97459 AC096628.2-201ENSMUST00000225443 1413 ntBASIC10.48□□□□□ -0.73
Npas1P97459 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC10.48□□□□□ -0.73
Npas1P97459 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Npas1P97459 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC10.48□□□□□ -0.73
Npas1P97459 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Npas1P97459 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Npas1P97459 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Npas1P97459 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Npas1P97459 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
Npas1P97459 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Npas1P97459 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Npas1P97459 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Npas1P97459 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Npas1P97459 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Npas1P97459 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Npas1P97459 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC10.47□□□□□ -0.73
Npas1P97459 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Npas1P97459 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC10.47□□□□□ -0.73
Npas1P97459 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Npas1P97459 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Npas1P97459 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Npas1P97459 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Npas1P97459 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Npas1P97459 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Npas1P97459 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Npas1P97459 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC10.47□□□□□ -0.73
Npas1P97459 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Npas1P97459 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Npas1P97459 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC10.47□□□□□ -0.73
Npas1P97459 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Npas1P97459 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC10.47□□□□□ -0.73
Npas1P97459 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Npas1P97459 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC10.47□□□□□ -0.73
Npas1P97459 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Npas1P97459 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
Npas1P97459 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC10.47□□□□□ -0.73
Npas1P97459 Gm26308-201ENSMUST00000157768 69 ntBASIC10.47□□□□□ -0.73
Npas1P97459 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC10.47□□□□□ -0.73
Npas1P97459 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Npas1P97459 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Npas1P97459 Gm19078-201ENSMUST00000206311 727 ntBASIC10.47□□□□□ -0.73
Npas1P97459 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Npas1P97459 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Npas1P97459 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC10.47□□□□□ -0.73
Npas1P97459 AC165157.4-201ENSMUST00000220587 139 ntBASIC10.47□□□□□ -0.73
Npas1P97459 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Npas1P97459 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Npas1P97459 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Npas1P97459 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Npas1P97459 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Npas1P97459 Gm6263-201ENSMUST00000120029 1342 ntBASIC10.47□□□□□ -0.73
Npas1P97459 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Npas1P97459 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Npas1P97459 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC10.47□□□□□ -0.73
Npas1P97459 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Npas1P97459 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Npas1P97459 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Npas1P97459 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Npas1P97459 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Npas1P97459 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Npas1P97459 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Npas1P97459 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC10.47□□□□□ -0.73
Npas1P97459 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC10.47□□□□□ -0.73
Npas1P97459 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Npas1P97459 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Npas1P97459 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Npas1P97459 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Npas1P97459 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Npas1P97459 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Npas1P97459 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Npas1P97459 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Npas1P97459 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Npas1P97459 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Npas1P97459 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC10.46□□□□□ -0.73
Npas1P97459 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Npas1P97459 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Npas1P97459 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Npas1P97459 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC10.46□□□□□ -0.73
Npas1P97459 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Npas1P97459 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC10.46□□□□□ -0.73
Npas1P97459 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Npas1P97459 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Npas1P97459 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Npas1P97459 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Npas1P97459 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Npas1P97459 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Npas1P97459 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
Npas1P97459 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Npas1P97459 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Npas1P97459 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Npas1P97459 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Npas1P97459 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC10.46□□□□□ -0.73
Npas1P97459 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC10.46□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms