Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.85□□□□□ -0.35
Trim43bP86448 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim43bP86448 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim43bP86448 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim43bP86448 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim43bP86448 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim43bP86448 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim43bP86448 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim43bP86448 Gm37014-201ENSMUST00000194723 2253 ntBASIC12.85□□□□□ -0.35
Trim43bP86448 AC131068.2-201ENSMUST00000226175 1453 ntBASIC12.85□□□□□ -0.35
Trim43bP86448 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim43bP86448 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.84□□□□□ -0.35
Trim43bP86448 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim43bP86448 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.84□□□□□ -0.35
Trim43bP86448 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.84□□□□□ -0.35
Trim43bP86448 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim43bP86448 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.84□□□□□ -0.35
Trim43bP86448 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim43bP86448 Mir686-201ENSMUST00000102174 109 ntBASIC12.84□□□□□ -0.35
Trim43bP86448 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim43bP86448 Gm12203-201ENSMUST00000118235 598 ntBASIC12.84□□□□□ -0.35
Trim43bP86448 Gm12209-201ENSMUST00000120089 596 ntBASIC12.84□□□□□ -0.35
Trim43bP86448 Gm13813-201ENSMUST00000120998 787 ntBASIC12.84□□□□□ -0.35
Trim43bP86448 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trim43bP86448 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.84□□□□□ -0.35
Trim43bP86448 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trim43bP86448 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC12.84□□□□□ -0.35
Trim43bP86448 Gm17420-201ENSMUST00000164753 153 ntBASIC12.84□□□□□ -0.35
Trim43bP86448 Gm26927-201ENSMUST00000182385 965 ntBASIC12.84□□□□□ -0.35
Trim43bP86448 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.84□□□□□ -0.35
Trim43bP86448 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim43bP86448 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim43bP86448 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim43bP86448 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim43bP86448 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim43bP86448 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim43bP86448 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
Trim43bP86448 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim43bP86448 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim43bP86448 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim43bP86448 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
Trim43bP86448 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.84□□□□□ -0.35
Trim43bP86448 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trim43bP86448 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim43bP86448 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.83□□□□□ -0.35
Trim43bP86448 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.83□□□□□ -0.35
Trim43bP86448 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trim43bP86448 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trim43bP86448 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim43bP86448 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trim43bP86448 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.83□□□□□ -0.36
Trim43bP86448 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trim43bP86448 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim43bP86448 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.83□□□□□ -0.36
Trim43bP86448 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim43bP86448 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trim43bP86448 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Trim43bP86448 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim43bP86448 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trim43bP86448 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trim43bP86448 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
Trim43bP86448 Gm11978-201ENSMUST00000122315 466 ntBASIC12.83□□□□□ -0.36
Trim43bP86448 Gm2231-201ENSMUST00000125661 612 ntBASIC12.83□□□□□ -0.36
Trim43bP86448 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim43bP86448 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC12.83□□□□□ -0.36
Trim43bP86448 Gm44069-201ENSMUST00000204898 506 ntBASIC12.83□□□□□ -0.36
Trim43bP86448 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.83□□□□□ -0.36
Trim43bP86448 AC122459.1-201ENSMUST00000228373 885 ntBASIC12.83□□□□□ -0.36
Trim43bP86448 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim43bP86448 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim43bP86448 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Trim43bP86448 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Trim43bP86448 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trim43bP86448 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim43bP86448 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim43bP86448 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim43bP86448 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim43bP86448 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim43bP86448 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.83□□□□□ -0.36
Trim43bP86448 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.83□□□□□ -0.36
Trim43bP86448 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC12.83□□□□□ -0.36
Trim43bP86448 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Trim43bP86448 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim43bP86448 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim43bP86448 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.82□□□□□ -0.36
Trim43bP86448 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim43bP86448 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim43bP86448 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Trim43bP86448 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim43bP86448 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim43bP86448 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim43bP86448 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim43bP86448 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim43bP86448 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.82□□□□□ -0.36
Trim43bP86448 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC12.82□□□□□ -0.36
Trim43bP86448 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.82□□□□□ -0.36
Trim43bP86448 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.82□□□□□ -0.36
Trim43bP86448 Map1b-203ENSMUST00000223725 2669 ntBASIC12.82□□□□□ -0.36
Trim43bP86448 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim43bP86448 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms