Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Pdlim4P70271 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Pdlim4P70271 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Pdlim4P70271 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Pdlim4P70271 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Pdlim4P70271 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC10.42□□□□□ -0.74
Pdlim4P70271 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Pdlim4P70271 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Pdlim4P70271 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC10.42□□□□□ -0.74
Pdlim4P70271 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Pdlim4P70271 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Pdlim4P70271 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC10.42□□□□□ -0.74
Pdlim4P70271 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pdlim4P70271 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC10.41□□□□□ -0.74
Pdlim4P70271 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC10.41□□□□□ -0.74
Pdlim4P70271 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC10.41□□□□□ -0.74
Pdlim4P70271 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pdlim4P70271 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Pdlim4P70271 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pdlim4P70271 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pdlim4P70271 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pdlim4P70271 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pdlim4P70271 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Pdlim4P70271 Gm6023-201ENSMUST00000118217 606 ntBASIC10.41□□□□□ -0.74
Pdlim4P70271 Gm12329-201ENSMUST00000120829 1007 ntBASIC10.41□□□□□ -0.74
Pdlim4P70271 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC10.41□□□□□ -0.74
Pdlim4P70271 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pdlim4P70271 Gm8738-201ENSMUST00000172606 329 ntBASIC10.41□□□□□ -0.74
Pdlim4P70271 Gm3890-201ENSMUST00000182416 207 ntBASIC10.41□□□□□ -0.74
Pdlim4P70271 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Pdlim4P70271 CT025678.1-201ENSMUST00000214795 2972 ntBASIC10.41□□□□□ -0.74
Pdlim4P70271 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC10.41□□□□□ -0.74
Pdlim4P70271 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC10.41□□□□□ -0.74
Pdlim4P70271 AC154462.2-201ENSMUST00000227519 370 ntBASIC10.41□□□□□ -0.74
Pdlim4P70271 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pdlim4P70271 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pdlim4P70271 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pdlim4P70271 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pdlim4P70271 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pdlim4P70271 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Pdlim4P70271 Gm43045-201ENSMUST00000198725 2095 ntBASIC10.41□□□□□ -0.74
Pdlim4P70271 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pdlim4P70271 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Pdlim4P70271 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pdlim4P70271 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pdlim4P70271 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pdlim4P70271 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pdlim4P70271 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pdlim4P70271 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pdlim4P70271 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Pdlim4P70271 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC10.4□□□□□ -0.74
Pdlim4P70271 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Pdlim4P70271 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Pdlim4P70271 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Pdlim4P70271 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Pdlim4P70271 Rnf17-202ENSMUST00000223627 2077 ntBASIC10.4□□□□□ -0.74
Pdlim4P70271 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Pdlim4P70271 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Pdlim4P70271 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Pdlim4P70271 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Pdlim4P70271 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Pdlim4P70271 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Pdlim4P70271 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Pdlim4P70271 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Pdlim4P70271 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Pdlim4P70271 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Pdlim4P70271 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Pdlim4P70271 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC10.4□□□□□ -0.74
Pdlim4P70271 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC10.4□□□□□ -0.74
Pdlim4P70271 Gm23931-201ENSMUST00000103842 109 ntBASIC10.4□□□□□ -0.74
Pdlim4P70271 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Pdlim4P70271 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC10.4□□□□□ -0.74
Pdlim4P70271 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC10.4□□□□□ -0.74
Pdlim4P70271 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Pdlim4P70271 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC10.4□□□□□ -0.74
Pdlim4P70271 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Pdlim4P70271 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Pdlim4P70271 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC10.4□□□□□ -0.74
Pdlim4P70271 Gm17823-201ENSMUST00000217830 1006 ntBASIC10.4□□□□□ -0.74
Pdlim4P70271 AC132317.1-201ENSMUST00000227227 962 ntBASIC10.4□□□□□ -0.74
Pdlim4P70271 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Pdlim4P70271 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Pdlim4P70271 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Pdlim4P70271 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Pdlim4P70271 Gm38385-201ENSMUST00000194454 2351 ntBASIC10.4□□□□□ -0.74
Pdlim4P70271 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Pdlim4P70271 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Pdlim4P70271 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.75
Pdlim4P70271 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Pdlim4P70271 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Pdlim4P70271 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Pdlim4P70271 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Pdlim4P70271 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.75
Pdlim4P70271 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.75
Pdlim4P70271 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC10.4□□□□□ -0.75
Pdlim4P70271 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.75
Pdlim4P70271 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Pdlim4P70271 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Pdlim4P70271 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC10.39□□□□□ -0.75
Pdlim4P70271 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms