Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Sec61a1P61620 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sec61a1P61620 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sec61a1P61620 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sec61a1P61620 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Sec61a1P61620 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sec61a1P61620 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sec61a1P61620 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC11.02□□□□□ -0.65
Sec61a1P61620 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sec61a1P61620 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
Sec61a1P61620 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Sec61a1P61620 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sec61a1P61620 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sec61a1P61620 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sec61a1P61620 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC11.02□□□□□ -0.65
Sec61a1P61620 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sec61a1P61620 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sec61a1P61620 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sec61a1P61620 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
Sec61a1P61620 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sec61a1P61620 Gm43174-201ENSMUST00000195914 2445 ntBASIC11.01□□□□□ -0.65
Sec61a1P61620 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC11.01□□□□□ -0.65
Sec61a1P61620 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.01□□□□□ -0.65
Sec61a1P61620 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sec61a1P61620 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC11.01□□□□□ -0.65
Sec61a1P61620 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sec61a1P61620 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sec61a1P61620 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.01□□□□□ -0.65
Sec61a1P61620 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sec61a1P61620 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sec61a1P61620 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Sec61a1P61620 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Sec61a1P61620 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sec61a1P61620 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sec61a1P61620 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC11.01□□□□□ -0.65
Sec61a1P61620 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sec61a1P61620 Gm13226-201ENSMUST00000117838 404 ntBASIC11.01□□□□□ -0.65
Sec61a1P61620 Gm6161-201ENSMUST00000121942 1102 ntBASIC11.01□□□□□ -0.65
Sec61a1P61620 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC11.01□□□□□ -0.65
Sec61a1P61620 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Sec61a1P61620 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Sec61a1P61620 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC11.01□□□□□ -0.65
Sec61a1P61620 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Sec61a1P61620 Gm6254-201ENSMUST00000168178 1072 ntBASIC11.01□□□□□ -0.65
Sec61a1P61620 Gm6153-201ENSMUST00000172004 1058 ntBASIC11.01□□□□□ -0.65
Sec61a1P61620 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Sec61a1P61620 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sec61a1P61620 Gm29127-201ENSMUST00000188304 517 ntBASIC11.01□□□□□ -0.65
Sec61a1P61620 Gm5641-202ENSMUST00000198699 1080 ntBASIC11.01□□□□□ -0.65
Sec61a1P61620 AC153962.4-201ENSMUST00000217878 242 ntBASIC11.01□□□□□ -0.65
Sec61a1P61620 CT573086.1-201ENSMUST00000227202 1074 ntBASIC11.01□□□□□ -0.65
Sec61a1P61620 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sec61a1P61620 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sec61a1P61620 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sec61a1P61620 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sec61a1P61620 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sec61a1P61620 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC11.01□□□□□ -0.65
Sec61a1P61620 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sec61a1P61620 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sec61a1P61620 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sec61a1P61620 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sec61a1P61620 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Sec61a1P61620 Gm37513-201ENSMUST00000194830 2268 ntBASIC11.01□□□□□ -0.65
Sec61a1P61620 Gm38378-201ENSMUST00000195153 2268 ntBASIC11.01□□□□□ -0.65
Sec61a1P61620 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sec61a1P61620 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC11.01□□□□□ -0.65
Sec61a1P61620 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sec61a1P61620 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sec61a1P61620 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Sec61a1P61620 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Sec61a1P61620 AC131068.2-201ENSMUST00000226175 1453 ntBASIC11□□□□□ -0.65
Sec61a1P61620 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC11□□□□□ -0.65
Sec61a1P61620 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC11□□□□□ -0.65
Sec61a1P61620 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC11□□□□□ -0.65
Sec61a1P61620 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sec61a1P61620 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC11□□□□□ -0.65
Sec61a1P61620 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC11□□□□□ -0.65
Sec61a1P61620 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sec61a1P61620 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sec61a1P61620 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC11□□□□□ -0.65
Sec61a1P61620 Gm43075-201ENSMUST00000198613 3905 ntBASIC11□□□□□ -0.65
Sec61a1P61620 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
Sec61a1P61620 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sec61a1P61620 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC11□□□□□ -0.65
Sec61a1P61620 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sec61a1P61620 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Sec61a1P61620 Gm11400-201ENSMUST00000120853 1214 ntBASIC11□□□□□ -0.65
Sec61a1P61620 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC11□□□□□ -0.65
Sec61a1P61620 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sec61a1P61620 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC11□□□□□ -0.65
Sec61a1P61620 AY702102-202ENSMUST00000194651 1173 ntBASIC11□□□□□ -0.65
Sec61a1P61620 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC11□□□□□ -0.65
Sec61a1P61620 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC11□□□□□ -0.65
Sec61a1P61620 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC11□□□□□ -0.65
Sec61a1P61620 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC11□□□□□ -0.65
Sec61a1P61620 AC140451.2-201ENSMUST00000228030 664 ntBASIC11□□□□□ -0.65
Sec61a1P61620 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC11□□□□□ -0.65
Sec61a1P61620 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11□□□□□ -0.65
Sec61a1P61620 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sec61a1P61620 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC11□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms