Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Nup43P59235 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nup43P59235 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
Nup43P59235 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nup43P59235 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Nup43P59235 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nup43P59235 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nup43P59235 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC11.78□□□□□ -0.52
Nup43P59235 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Nup43P59235 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Nup43P59235 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Nup43P59235 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Nup43P59235 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Nup43P59235 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Nup43P59235 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC11.78□□□□□ -0.52
Nup43P59235 Gm14999-201ENSMUST00000121039 624 ntBASIC11.78□□□□□ -0.52
Nup43P59235 Gm8908-201ENSMUST00000121633 1024 ntBASIC11.78□□□□□ -0.52
Nup43P59235 Gm9630-201ENSMUST00000178304 885 ntBASIC11.78□□□□□ -0.52
Nup43P59235 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC11.78□□□□□ -0.52
Nup43P59235 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC11.78□□□□□ -0.52
Nup43P59235 Gm38266-201ENSMUST00000194931 421 ntBASIC11.78□□□□□ -0.52
Nup43P59235 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC11.78□□□□□ -0.52
Nup43P59235 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC11.78□□□□□ -0.52
Nup43P59235 Gm43930-201ENSMUST00000203868 845 ntBASIC11.78□□□□□ -0.52
Nup43P59235 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC11.78□□□□□ -0.52
Nup43P59235 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nup43P59235 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nup43P59235 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nup43P59235 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Nup43P59235 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Nup43P59235 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nup43P59235 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Nup43P59235 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nup43P59235 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC11.78□□□□□ -0.52
Nup43P59235 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nup43P59235 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nup43P59235 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC11.78□□□□□ -0.52
Nup43P59235 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Nup43P59235 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nup43P59235 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Nup43P59235 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Nup43P59235 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Nup43P59235 Ntrk2-204ENSMUST00000224259 3049 ntBASIC11.78□□□□□ -0.52
Nup43P59235 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
Nup43P59235 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nup43P59235 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nup43P59235 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nup43P59235 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Nup43P59235 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Nup43P59235 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Nup43P59235 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Nup43P59235 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Nup43P59235 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Nup43P59235 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Nup43P59235 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC11.77□□□□□ -0.52
Nup43P59235 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Nup43P59235 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Nup43P59235 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.52
Nup43P59235 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nup43P59235 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Nup43P59235 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nup43P59235 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Nup43P59235 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nup43P59235 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Nup43P59235 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Nup43P59235 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC11.77□□□□□ -0.53
Nup43P59235 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC11.77□□□□□ -0.53
Nup43P59235 Gm2991-201ENSMUST00000173338 480 ntBASIC11.77□□□□□ -0.53
Nup43P59235 Gm26956-201ENSMUST00000182176 986 ntBASIC11.77□□□□□ -0.53
Nup43P59235 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC11.77□□□□□ -0.53
Nup43P59235 Gm18304-201ENSMUST00000189162 546 ntBASIC11.77□□□□□ -0.53
Nup43P59235 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC11.77□□□□□ -0.53
Nup43P59235 Gm6334-201ENSMUST00000207083 228 ntBASIC11.77□□□□□ -0.53
Nup43P59235 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC11.77□□□□□ -0.53
Nup43P59235 Gm39404-201ENSMUST00000216350 313 ntBASIC11.77□□□□□ -0.53
Nup43P59235 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC11.77□□□□□ -0.53
Nup43P59235 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Nup43P59235 Gm17383-201ENSMUST00000078739 1041 ntBASIC11.77□□□□□ -0.53
Nup43P59235 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nup43P59235 Gm2673-201ENSMUST00000120958 1608 ntBASIC11.77□□□□□ -0.53
Nup43P59235 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nup43P59235 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nup43P59235 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nup43P59235 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC11.77□□□□□ -0.53
Nup43P59235 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Nup43P59235 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Nup43P59235 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.77□□□□□ -0.53
Nup43P59235 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nup43P59235 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nup43P59235 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.77□□□□□ -0.53
Nup43P59235 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nup43P59235 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nup43P59235 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nup43P59235 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nup43P59235 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nup43P59235 AC126262.1-201ENSMUST00000221802 1904 ntBASIC11.76□□□□□ -0.53
Nup43P59235 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nup43P59235 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Nup43P59235 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Nup43P59235 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms