Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC14.05□□□□□ -0.16
Rrp1P56183 Gm18636-201ENSMUST00000218846 1066 ntBASIC14.05□□□□□ -0.16
Rrp1P56183 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rrp1P56183 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rrp1P56183 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Rrp1P56183 Gm10012-201ENSMUST00000078252 192 ntBASIC14.05□□□□□ -0.16
Rrp1P56183 Gm37324-201ENSMUST00000194500 4504 ntBASIC14.05□□□□□ -0.16
Rrp1P56183 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rrp1P56183 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rrp1P56183 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rrp1P56183 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC14.05□□□□□ -0.16
Rrp1P56183 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rrp1P56183 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rrp1P56183 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rrp1P56183 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rrp1P56183 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rrp1P56183 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
Rrp1P56183 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC14.05□□□□□ -0.16
Rrp1P56183 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Rrp1P56183 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rrp1P56183 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rrp1P56183 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rrp1P56183 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Rrp1P56183 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rrp1P56183 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Rrp1P56183 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rrp1P56183 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC14.04□□□□□ -0.16
Rrp1P56183 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rrp1P56183 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC14.04□□□□□ -0.16
Rrp1P56183 Gm9002-201ENSMUST00000178437 499 ntBASIC14.04□□□□□ -0.16
Rrp1P56183 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rrp1P56183 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC14.04□□□□□ -0.16
Rrp1P56183 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC14.04□□□□□ -0.16
Rrp1P56183 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC14.04□□□□□ -0.16
Rrp1P56183 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Rrp1P56183 CT030657.3-201ENSMUST00000222707 1200 ntBASIC14.04□□□□□ -0.16
Rrp1P56183 Gm19163-201ENSMUST00000223313 780 ntBASIC14.04□□□□□ -0.16
Rrp1P56183 AC110817.1-201ENSMUST00000225706 605 ntBASIC14.04□□□□□ -0.16
Rrp1P56183 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rrp1P56183 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rrp1P56183 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rrp1P56183 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rrp1P56183 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rrp1P56183 Gm5356-201ENSMUST00000093326 615 ntBASIC14.04□□□□□ -0.16
Rrp1P56183 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rrp1P56183 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rrp1P56183 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Rrp1P56183 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rrp1P56183 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Rrp1P56183 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rrp1P56183 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rrp1P56183 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Rrp1P56183 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rrp1P56183 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rrp1P56183 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rrp1P56183 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rrp1P56183 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rrp1P56183 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rrp1P56183 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rrp1P56183 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rrp1P56183 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rrp1P56183 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rrp1P56183 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rrp1P56183 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rrp1P56183 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC14.03□□□□□ -0.16
Rrp1P56183 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC14.03□□□□□ -0.16
Rrp1P56183 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rrp1P56183 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rrp1P56183 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rrp1P56183 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Rrp1P56183 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC14.03□□□□□ -0.16
Rrp1P56183 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Rrp1P56183 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Rrp1P56183 Gm27243-201ENSMUST00000183964 521 ntBASIC14.03□□□□□ -0.16
Rrp1P56183 Gm18187-201ENSMUST00000196476 984 ntBASIC14.03□□□□□ -0.16
Rrp1P56183 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Rrp1P56183 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rrp1P56183 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rrp1P56183 Gm5884-201ENSMUST00000036712 1479 ntBASIC14.03□□□□□ -0.16
Rrp1P56183 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rrp1P56183 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rrp1P56183 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rrp1P56183 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rrp1P56183 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rrp1P56183 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rrp1P56183 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rrp1P56183 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rrp1P56183 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rrp1P56183 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Rrp1P56183 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rrp1P56183 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rrp1P56183 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rrp1P56183 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Rrp1P56183 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rrp1P56183 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rrp1P56183 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rrp1P56183 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Rrp1P56183 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rrp1P56183 Gm37105-201ENSMUST00000192251 2085 ntBASIC14.02□□□□□ -0.16
Rrp1P56183 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms