Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Fdft1P53798 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.47□□□□□ -0.41
Fdft1P53798 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.47□□□□□ -0.41
Fdft1P53798 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Fdft1P53798 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Fdft1P53798 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Fdft1P53798 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Fdft1P53798 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Fdft1P53798 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Fdft1P53798 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Fdft1P53798 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Fdft1P53798 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Fdft1P53798 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Fdft1P53798 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
Fdft1P53798 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Fdft1P53798 Gm5745-201ENSMUST00000183748 313 ntBASIC12.47□□□□□ -0.41
Fdft1P53798 Gm27682-201ENSMUST00000183930 110 ntBASIC12.47□□□□□ -0.41
Fdft1P53798 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12.47□□□□□ -0.41
Fdft1P53798 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Fdft1P53798 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC12.47□□□□□ -0.41
Fdft1P53798 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Fdft1P53798 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Fdft1P53798 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Fdft1P53798 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Fdft1P53798 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Fdft1P53798 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Fdft1P53798 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Fdft1P53798 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Fdft1P53798 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Fdft1P53798 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Fdft1P53798 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Fdft1P53798 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.47□□□□□ -0.41
Fdft1P53798 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.47□□□□□ -0.41
Fdft1P53798 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Fdft1P53798 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Fdft1P53798 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Fdft1P53798 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Fdft1P53798 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Fdft1P53798 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Fdft1P53798 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Fdft1P53798 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Fdft1P53798 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Fdft1P53798 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC12.46□□□□□ -0.41
Fdft1P53798 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Fdft1P53798 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Fdft1P53798 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Fdft1P53798 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Fdft1P53798 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.46□□□□□ -0.41
Fdft1P53798 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Fdft1P53798 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.46□□□□□ -0.41
Fdft1P53798 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Fdft1P53798 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Fdft1P53798 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Fdft1P53798 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Fdft1P53798 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Fdft1P53798 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Fdft1P53798 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Fdft1P53798 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.46□□□□□ -0.41
Fdft1P53798 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
Fdft1P53798 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.46□□□□□ -0.41
Fdft1P53798 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Fdft1P53798 Gm26927-201ENSMUST00000182385 965 ntBASIC12.46□□□□□ -0.41
Fdft1P53798 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Fdft1P53798 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Fdft1P53798 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Fdft1P53798 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.46□□□□□ -0.41
Fdft1P53798 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Fdft1P53798 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Fdft1P53798 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Fdft1P53798 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Fdft1P53798 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Fdft1P53798 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.42
Fdft1P53798 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Fdft1P53798 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Fdft1P53798 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Fdft1P53798 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.46□□□□□ -0.42
Fdft1P53798 Gm18983-201ENSMUST00000222884 2729 ntBASIC12.46□□□□□ -0.42
Fdft1P53798 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.45□□□□□ -0.42
Fdft1P53798 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC12.45□□□□□ -0.42
Fdft1P53798 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Fdft1P53798 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Fdft1P53798 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
Fdft1P53798 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Fdft1P53798 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Fdft1P53798 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.45□□□□□ -0.42
Fdft1P53798 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Fdft1P53798 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Fdft1P53798 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12.45□□□□□ -0.42
Fdft1P53798 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Fdft1P53798 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Fdft1P53798 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Fdft1P53798 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Fdft1P53798 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Fdft1P53798 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.45□□□□□ -0.42
Fdft1P53798 Gm37748-201ENSMUST00000194379 1140 ntBASIC12.45□□□□□ -0.42
Fdft1P53798 Gm6266-201ENSMUST00000203844 806 ntBASIC12.45□□□□□ -0.42
Fdft1P53798 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.45□□□□□ -0.42
Fdft1P53798 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Fdft1P53798 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Fdft1P53798 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 71.4 ms