Protein–RNA interactions for Protein: P50586

Tub, Tubby protein, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TubP50586 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TubP50586 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TubP50586 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
TubP50586 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TubP50586 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TubP50586 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
TubP50586 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TubP50586 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
TubP50586 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.79□□□□□ -0.36
TubP50586 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.79□□□□□ -0.36
TubP50586 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
TubP50586 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TubP50586 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TubP50586 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TubP50586 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.79□□□□□ -0.36
TubP50586 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
TubP50586 Gm25214-201ENSMUST00000104573 129 ntBASIC12.79□□□□□ -0.36
TubP50586 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TubP50586 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TubP50586 Gm11222-201ENSMUST00000119005 738 ntBASIC12.79□□□□□ -0.36
TubP50586 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TubP50586 Gm13570-201ENSMUST00000140763 309 ntBASIC12.79□□□□□ -0.36
TubP50586 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TubP50586 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
TubP50586 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TubP50586 Gm7895-201ENSMUST00000187459 1173 ntBASIC12.79□□□□□ -0.36
TubP50586 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC12.79□□□□□ -0.36
TubP50586 Gm44364-201ENSMUST00000198368 141 ntBASIC12.79□□□□□ -0.36
TubP50586 Gm30285-201ENSMUST00000214614 422 ntBASIC12.79□□□□□ -0.36
TubP50586 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TubP50586 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TubP50586 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
TubP50586 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
TubP50586 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
TubP50586 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TubP50586 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TubP50586 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
TubP50586 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TubP50586 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TubP50586 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
TubP50586 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
TubP50586 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TubP50586 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TubP50586 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TubP50586 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TubP50586 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TubP50586 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TubP50586 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TubP50586 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TubP50586 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.78□□□□□ -0.36
TubP50586 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TubP50586 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.78□□□□□ -0.36
TubP50586 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
TubP50586 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TubP50586 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
TubP50586 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TubP50586 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TubP50586 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
TubP50586 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
TubP50586 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC12.78□□□□□ -0.36
TubP50586 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
TubP50586 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
TubP50586 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TubP50586 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
TubP50586 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC12.78□□□□□ -0.36
TubP50586 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TubP50586 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TubP50586 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TubP50586 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TubP50586 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.78□□□□□ -0.36
TubP50586 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.78□□□□□ -0.36
TubP50586 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
TubP50586 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
TubP50586 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.78□□□□□ -0.36
TubP50586 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
TubP50586 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
TubP50586 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
TubP50586 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
TubP50586 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TubP50586 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
TubP50586 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
TubP50586 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
TubP50586 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
TubP50586 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
TubP50586 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
TubP50586 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
TubP50586 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
TubP50586 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
TubP50586 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC12.77□□□□□ -0.37
TubP50586 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC12.77□□□□□ -0.37
TubP50586 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TubP50586 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TubP50586 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TubP50586 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC12.77□□□□□ -0.37
TubP50586 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TubP50586 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC12.77□□□□□ -0.37
TubP50586 Gm38341-201ENSMUST00000195357 515 ntBASIC12.77□□□□□ -0.37
TubP50586 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
TubP50586 Gm43758-201ENSMUST00000199500 367 ntBASIC12.77□□□□□ -0.37
TubP50586 Gm21769-201ENSMUST00000211922 111 ntBASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms