Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ercc3P49135 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ercc3P49135 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ercc3P49135 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ercc3P49135 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ercc3P49135 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ercc3P49135 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Ercc3P49135 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC14.82□□□□□ -0.04
Ercc3P49135 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ercc3P49135 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ercc3P49135 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ercc3P49135 Gm42480-201ENSMUST00000198434 2595 ntBASIC14.81□□□□□ -0.04
Ercc3P49135 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ercc3P49135 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ercc3P49135 Gm2420-201ENSMUST00000119864 2149 ntBASIC14.81□□□□□ -0.04
Ercc3P49135 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ercc3P49135 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ercc3P49135 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ercc3P49135 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ercc3P49135 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ercc3P49135 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ercc3P49135 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ercc3P49135 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC14.81□□□□□ -0.04
Ercc3P49135 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ercc3P49135 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC14.81□□□□□ -0.04
Ercc3P49135 Gm15703-201ENSMUST00000120250 880 ntBASIC14.81□□□□□ -0.04
Ercc3P49135 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC14.81□□□□□ -0.04
Ercc3P49135 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC14.81□□□□□ -0.04
Ercc3P49135 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Ercc3P49135 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ercc3P49135 Gm9022-201ENSMUST00000182482 992 ntBASIC14.81□□□□□ -0.04
Ercc3P49135 Gm38266-201ENSMUST00000194931 421 ntBASIC14.81□□□□□ -0.04
Ercc3P49135 Gm38341-201ENSMUST00000195357 515 ntBASIC14.81□□□□□ -0.04
Ercc3P49135 Gm7118-201ENSMUST00000200167 1003 ntBASIC14.81□□□□□ -0.04
Ercc3P49135 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ercc3P49135 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ercc3P49135 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ercc3P49135 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC14.81□□□□□ -0.04
Ercc3P49135 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ercc3P49135 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ercc3P49135 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ercc3P49135 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ercc3P49135 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ercc3P49135 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC14.81□□□□□ -0.04
Ercc3P49135 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Ercc3P49135 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ercc3P49135 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC14.8□□□□□ -0.04
Ercc3P49135 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ercc3P49135 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Ercc3P49135 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ercc3P49135 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ercc3P49135 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ercc3P49135 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ercc3P49135 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC14.8□□□□□ -0.04
Ercc3P49135 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ercc3P49135 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC14.8□□□□□ -0.04
Ercc3P49135 Gm25043-201ENSMUST00000158604 212 ntBASIC14.8□□□□□ -0.04
Ercc3P49135 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC14.8□□□□□ -0.04
Ercc3P49135 Ighv1-62-201ENSMUST00000193406 350 ntBASIC14.8□□□□□ -0.04
Ercc3P49135 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC14.8□□□□□ -0.04
Ercc3P49135 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ercc3P49135 AC113031.8-201ENSMUST00000227856 631 ntBASIC14.8□□□□□ -0.04
Ercc3P49135 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ercc3P49135 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ercc3P49135 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ercc3P49135 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC14.8□□□□□ -0.04
Ercc3P49135 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ercc3P49135 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Ercc3P49135 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ercc3P49135 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ercc3P49135 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ercc3P49135 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ercc3P49135 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC14.79□□□□□ -0.04
Ercc3P49135 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ercc3P49135 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ercc3P49135 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ercc3P49135 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ercc3P49135 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ercc3P49135 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ercc3P49135 Gm10434-201ENSMUST00000101158 471 ntBASIC14.79□□□□□ -0.04
Ercc3P49135 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ercc3P49135 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ercc3P49135 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Ercc3P49135 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ercc3P49135 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ercc3P49135 Gm13350-201ENSMUST00000120519 479 ntBASIC14.79□□□□□ -0.04
Ercc3P49135 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ercc3P49135 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ercc3P49135 Rmrp-201ENSMUST00000157463 271 ntBASIC14.79□□□□□ -0.04
Ercc3P49135 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ercc3P49135 Gm5597-201ENSMUST00000182353 1193 ntBASIC14.79□□□□□ -0.04
Ercc3P49135 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC14.79□□□□□ -0.04
Ercc3P49135 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC14.79□□□□□ -0.04
Ercc3P49135 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ercc3P49135 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC14.79□□□□□ -0.04
Ercc3P49135 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ercc3P49135 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ercc3P49135 Gm30285-201ENSMUST00000214614 422 ntBASIC14.79□□□□□ -0.04
Ercc3P49135 AL732506.1-201ENSMUST00000226420 281 ntBASIC14.79□□□□□ -0.04
Ercc3P49135 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms