Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.67□□□□□ -0.38
Vps4bP46467 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Vps4bP46467 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vps4bP46467 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vps4bP46467 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.67□□□□□ -0.38
Vps4bP46467 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vps4bP46467 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Vps4bP46467 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vps4bP46467 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vps4bP46467 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vps4bP46467 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vps4bP46467 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vps4bP46467 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vps4bP46467 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Vps4bP46467 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vps4bP46467 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Vps4bP46467 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12.66□□□□□ -0.38
Vps4bP46467 Gm13492-201ENSMUST00000119772 665 ntBASIC12.66□□□□□ -0.38
Vps4bP46467 Gm12363-201ENSMUST00000122250 668 ntBASIC12.66□□□□□ -0.38
Vps4bP46467 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.66□□□□□ -0.38
Vps4bP46467 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC12.66□□□□□ -0.38
Vps4bP46467 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Vps4bP46467 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Vps4bP46467 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC12.66□□□□□ -0.38
Vps4bP46467 Gm29649-201ENSMUST00000185649 419 ntBASIC12.66□□□□□ -0.38
Vps4bP46467 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.66□□□□□ -0.38
Vps4bP46467 Gm42442-201ENSMUST00000197951 1133 ntBASIC12.66□□□□□ -0.38
Vps4bP46467 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vps4bP46467 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vps4bP46467 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Vps4bP46467 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vps4bP46467 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Vps4bP46467 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vps4bP46467 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Vps4bP46467 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vps4bP46467 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vps4bP46467 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Vps4bP46467 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Vps4bP46467 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vps4bP46467 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vps4bP46467 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Vps4bP46467 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.66□□□□□ -0.38
Vps4bP46467 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vps4bP46467 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vps4bP46467 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Vps4bP46467 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vps4bP46467 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vps4bP46467 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.65□□□□□ -0.38
Vps4bP46467 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vps4bP46467 Matn2-203ENSMUST00000226766 3252 ntBASIC12.65□□□□□ -0.38
Vps4bP46467 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vps4bP46467 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vps4bP46467 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Vps4bP46467 Cog3-203ENSMUST00000227473 4197 ntBASIC12.65□□□□□ -0.38
Vps4bP46467 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vps4bP46467 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Vps4bP46467 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Vps4bP46467 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Vps4bP46467 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Vps4bP46467 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vps4bP46467 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Vps4bP46467 Rmrp-201ENSMUST00000157463 271 ntBASIC12.65□□□□□ -0.38
Vps4bP46467 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Vps4bP46467 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC12.65□□□□□ -0.38
Vps4bP46467 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.65□□□□□ -0.38
Vps4bP46467 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Vps4bP46467 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vps4bP46467 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vps4bP46467 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vps4bP46467 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.65□□□□□ -0.38
Vps4bP46467 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vps4bP46467 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vps4bP46467 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vps4bP46467 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vps4bP46467 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Vps4bP46467 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Vps4bP46467 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Vps4bP46467 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Vps4bP46467 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Vps4bP46467 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps4bP46467 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Vps4bP46467 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.64□□□□□ -0.39
Vps4bP46467 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps4bP46467 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps4bP46467 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps4bP46467 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps4bP46467 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps4bP46467 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Vps4bP46467 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps4bP46467 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps4bP46467 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps4bP46467 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Vps4bP46467 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Vps4bP46467 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps4bP46467 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps4bP46467 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Vps4bP46467 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Vps4bP46467 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps4bP46467 Gm26927-201ENSMUST00000182385 965 ntBASIC12.64□□□□□ -0.39
Vps4bP46467 Gm38092-201ENSMUST00000195600 653 ntBASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 100.4 ms