Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Map1b-203ENSMUST00000223725 2669 ntBASIC12.04□□□□□ -0.48
Tnfsf4P43488 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Tnfsf4P43488 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfsf4P43488 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfsf4P43488 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfsf4P43488 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfsf4P43488 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfsf4P43488 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfsf4P43488 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC12.04□□□□□ -0.48
Tnfsf4P43488 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfsf4P43488 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfsf4P43488 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.04□□□□□ -0.48
Tnfsf4P43488 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfsf4P43488 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfsf4P43488 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfsf4P43488 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfsf4P43488 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfsf4P43488 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfsf4P43488 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfsf4P43488 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.03□□□□□ -0.48
Tnfsf4P43488 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
Tnfsf4P43488 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfsf4P43488 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfsf4P43488 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfsf4P43488 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.03□□□□□ -0.48
Tnfsf4P43488 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.03□□□□□ -0.48
Tnfsf4P43488 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.03□□□□□ -0.48
Tnfsf4P43488 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfsf4P43488 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfsf4P43488 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfsf4P43488 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfsf4P43488 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfsf4P43488 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfsf4P43488 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Tnfsf4P43488 Gm11814-201ENSMUST00000119515 929 ntBASIC12.03□□□□□ -0.48
Tnfsf4P43488 Gm12960-201ENSMUST00000120017 1066 ntBASIC12.03□□□□□ -0.48
Tnfsf4P43488 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfsf4P43488 Rmrp-201ENSMUST00000157463 271 ntBASIC12.03□□□□□ -0.48
Tnfsf4P43488 Gm22331-201ENSMUST00000158066 136 ntBASIC12.03□□□□□ -0.48
Tnfsf4P43488 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.03□□□□□ -0.48
Tnfsf4P43488 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC12.03□□□□□ -0.48
Tnfsf4P43488 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.03□□□□□ -0.48
Tnfsf4P43488 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Tnfsf4P43488 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.03□□□□□ -0.48
Tnfsf4P43488 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfsf4P43488 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfsf4P43488 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.03□□□□□ -0.48
Tnfsf4P43488 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfsf4P43488 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfsf4P43488 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Tnfsf4P43488 Gm2238-201ENSMUST00000192074 3669 ntBASIC12.03□□□□□ -0.48
Tnfsf4P43488 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.03□□□□□ -0.48
Tnfsf4P43488 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.03□□□□□ -0.48
Tnfsf4P43488 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfsf4P43488 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfsf4P43488 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.03□□□□□ -0.48
Tnfsf4P43488 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfsf4P43488 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.03□□□□□ -0.48
Tnfsf4P43488 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Tnfsf4P43488 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.02□□□□□ -0.48
Tnfsf4P43488 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Tnfsf4P43488 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
Tnfsf4P43488 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Tnfsf4P43488 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Tnfsf4P43488 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Tnfsf4P43488 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfsf4P43488 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfsf4P43488 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfsf4P43488 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfsf4P43488 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Tnfsf4P43488 Gm4271-201ENSMUST00000174444 973 ntBASIC12.02□□□□□ -0.49
Tnfsf4P43488 Gm27892-201ENSMUST00000185017 106 ntBASIC12.02□□□□□ -0.49
Tnfsf4P43488 Gm42599-201ENSMUST00000201308 469 ntBASIC12.02□□□□□ -0.49
Tnfsf4P43488 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfsf4P43488 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfsf4P43488 Gm29705-201ENSMUST00000212598 474 ntBASIC12.02□□□□□ -0.49
Tnfsf4P43488 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfsf4P43488 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfsf4P43488 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfsf4P43488 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfsf4P43488 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfsf4P43488 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfsf4P43488 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfsf4P43488 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfsf4P43488 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfsf4P43488 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfsf4P43488 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfsf4P43488 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tnfsf4P43488 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfsf4P43488 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Tnfsf4P43488 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Tnfsf4P43488 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfsf4P43488 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Tnfsf4P43488 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfsf4P43488 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.01□□□□□ -0.49
Tnfsf4P43488 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfsf4P43488 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Tnfsf4P43488 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Tnfsf4P43488 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Tnfsf4P43488 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms