Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC11.42□□□□□ -0.58
Nkx2-2P42586 Gm25043-201ENSMUST00000158604 212 ntBASIC11.42□□□□□ -0.58
Nkx2-2P42586 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC11.42□□□□□ -0.58
Nkx2-2P42586 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC11.42□□□□□ -0.58
Nkx2-2P42586 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
Nkx2-2P42586 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx2-2P42586 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx2-2P42586 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC11.42□□□□□ -0.58
Nkx2-2P42586 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC11.42□□□□□ -0.58
Nkx2-2P42586 Gm42937-201ENSMUST00000197360 752 ntBASIC11.42□□□□□ -0.58
Nkx2-2P42586 AC126253.1-202ENSMUST00000226732 835 ntBASIC11.42□□□□□ -0.58
Nkx2-2P42586 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx2-2P42586 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Nkx2-2P42586 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx2-2P42586 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx2-2P42586 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Nkx2-2P42586 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx2-2P42586 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC11.42□□□□□ -0.58
Nkx2-2P42586 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx2-2P42586 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx2-2P42586 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx2-2P42586 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC11.42□□□□□ -0.58
Nkx2-2P42586 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx2-2P42586 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Nkx2-2P42586 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx2-2P42586 Gm7224-201ENSMUST00000121359 2066 ntBASIC11.42□□□□□ -0.58
Nkx2-2P42586 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx2-2P42586 AC122197.2-201ENSMUST00000219196 1635 ntBASIC11.42□□□□□ -0.58
Nkx2-2P42586 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx2-2P42586 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx2-2P42586 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx2-2P42586 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx2-2P42586 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Nkx2-2P42586 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC11.41□□□□□ -0.58
Nkx2-2P42586 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx2-2P42586 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx2-2P42586 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Nkx2-2P42586 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx2-2P42586 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx2-2P42586 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Nkx2-2P42586 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Nkx2-2P42586 Gm20554-201ENSMUST00000177421 2352 ntBASIC11.41□□□□□ -0.58
Nkx2-2P42586 Gm42480-201ENSMUST00000198434 2595 ntBASIC11.41□□□□□ -0.58
Nkx2-2P42586 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx2-2P42586 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx2-2P42586 Gm9361-201ENSMUST00000198695 1507 ntBASIC11.41□□□□□ -0.58
Nkx2-2P42586 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC11.41□□□□□ -0.58
Nkx2-2P42586 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx2-2P42586 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx2-2P42586 Gm36970-201ENSMUST00000193688 1859 ntBASIC11.41□□□□□ -0.58
Nkx2-2P42586 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx2-2P42586 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Nkx2-2P42586 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx2-2P42586 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Nkx2-2P42586 Gm4986-201ENSMUST00000119731 549 ntBASIC11.41□□□□□ -0.58
Nkx2-2P42586 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC11.41□□□□□ -0.58
Nkx2-2P42586 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC11.41□□□□□ -0.58
Nkx2-2P42586 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC11.41□□□□□ -0.58
Nkx2-2P42586 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC11.41□□□□□ -0.58
Nkx2-2P42586 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx2-2P42586 Gm37489-201ENSMUST00000191883 159 ntBASIC11.41□□□□□ -0.58
Nkx2-2P42586 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC11.41□□□□□ -0.58
Nkx2-2P42586 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC11.41□□□□□ -0.58
Nkx2-2P42586 Gm5950-201ENSMUST00000213337 772 ntBASIC11.41□□□□□ -0.58
Nkx2-2P42586 Gm10608-202ENSMUST00000213924 676 ntBASIC11.41□□□□□ -0.58
Nkx2-2P42586 Gm8227-201ENSMUST00000223306 571 ntBASIC11.41□□□□□ -0.58
Nkx2-2P42586 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx2-2P42586 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx2-2P42586 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC11.41□□□□□ -0.58
Nkx2-2P42586 AC167669.2-201ENSMUST00000224417 1620 ntBASIC11.41□□□□□ -0.58
Nkx2-2P42586 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx2-2P42586 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx2-2P42586 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Nkx2-2P42586 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx2-2P42586 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx2-2P42586 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx2-2P42586 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Nkx2-2P42586 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Nkx2-2P42586 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nkx2-2P42586 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Nkx2-2P42586 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nkx2-2P42586 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Nkx2-2P42586 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nkx2-2P42586 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Nkx2-2P42586 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nkx2-2P42586 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Nkx2-2P42586 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nkx2-2P42586 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nkx2-2P42586 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nkx2-2P42586 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nkx2-2P42586 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nkx2-2P42586 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nkx2-2P42586 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Nkx2-2P42586 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.58
Nkx2-2P42586 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Nkx2-2P42586 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Nkx2-2P42586 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Nkx2-2P42586 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Nkx2-2P42586 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Nkx2-2P42586 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms