Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Traf1P39428 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Traf1P39428 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC14.45□□□□□ -0.1
Traf1P39428 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Traf1P39428 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Traf1P39428 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Traf1P39428 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Traf1P39428 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Traf1P39428 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Traf1P39428 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Traf1P39428 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Traf1P39428 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Traf1P39428 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Traf1P39428 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Traf1P39428 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Traf1P39428 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
Traf1P39428 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC14.45□□□□□ -0.1
Traf1P39428 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Traf1P39428 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Traf1P39428 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Traf1P39428 Gm9678-201ENSMUST00000198979 1149 ntBASIC14.45□□□□□ -0.1
Traf1P39428 AC241621.2-201ENSMUST00000223991 2151 ntBASIC14.45□□□□□ -0.1
Traf1P39428 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Traf1P39428 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Traf1P39428 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Traf1P39428 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Traf1P39428 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Traf1P39428 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC14.45□□□□□ -0.1
Traf1P39428 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Traf1P39428 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Traf1P39428 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Traf1P39428 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Traf1P39428 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Traf1P39428 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
Traf1P39428 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Traf1P39428 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Traf1P39428 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Traf1P39428 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC14.45□□□□□ -0.1
Traf1P39428 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Traf1P39428 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Traf1P39428 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Traf1P39428 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Traf1P39428 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Traf1P39428 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC14.44□□□□□ -0.1
Traf1P39428 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Traf1P39428 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Traf1P39428 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC14.44□□□□□ -0.1
Traf1P39428 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Traf1P39428 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Traf1P39428 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Traf1P39428 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Traf1P39428 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Traf1P39428 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Traf1P39428 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Traf1P39428 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Traf1P39428 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC14.44□□□□□ -0.1
Traf1P39428 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Traf1P39428 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC14.44□□□□□ -0.1
Traf1P39428 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC14.44□□□□□ -0.1
Traf1P39428 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC14.44□□□□□ -0.1
Traf1P39428 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC14.44□□□□□ -0.1
Traf1P39428 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC14.44□□□□□ -0.1
Traf1P39428 AC166344.1-202ENSMUST00000224139 234 ntBASIC14.44□□□□□ -0.1
Traf1P39428 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC14.44□□□□□ -0.1
Traf1P39428 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Traf1P39428 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Traf1P39428 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Traf1P39428 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Traf1P39428 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Traf1P39428 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Traf1P39428 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC14.44□□□□□ -0.1
Traf1P39428 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC14.44□□□□□ -0.1
Traf1P39428 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Traf1P39428 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Traf1P39428 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC14.44□□□□□ -0.1
Traf1P39428 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Traf1P39428 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Traf1P39428 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Traf1P39428 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
Traf1P39428 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Traf1P39428 Gm43463-201ENSMUST00000195967 1803 ntBASIC14.43□□□□□ -0.1
Traf1P39428 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Traf1P39428 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Traf1P39428 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Traf1P39428 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Traf1P39428 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Traf1P39428 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC14.43□□□□□ -0.1
Traf1P39428 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Traf1P39428 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Traf1P39428 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC14.43□□□□□ -0.1
Traf1P39428 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Traf1P39428 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Traf1P39428 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Traf1P39428 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC14.43□□□□□ -0.1
Traf1P39428 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC14.43□□□□□ -0.1
Traf1P39428 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Traf1P39428 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Traf1P39428 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Traf1P39428 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Traf1P39428 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms