Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Rfc1P35601 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rfc1P35601 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rfc1P35601 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rfc1P35601 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rfc1P35601 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rfc1P35601 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rfc1P35601 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rfc1P35601 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC13.14□□□□□ -0.31
Rfc1P35601 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rfc1P35601 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rfc1P35601 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rfc1P35601 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rfc1P35601 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rfc1P35601 Gm15222-202ENSMUST00000228667 1726 ntBASIC13.14□□□□□ -0.31
Rfc1P35601 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rfc1P35601 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rfc1P35601 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rfc1P35601 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rfc1P35601 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rfc1P35601 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rfc1P35601 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC13.14□□□□□ -0.31
Rfc1P35601 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC13.14□□□□□ -0.31
Rfc1P35601 Gm16215-201ENSMUST00000161990 637 ntBASIC13.14□□□□□ -0.31
Rfc1P35601 AC124732.1-201ENSMUST00000221551 910 ntBASIC13.14□□□□□ -0.31
Rfc1P35601 AC169036.1-201ENSMUST00000227994 296 ntBASIC13.14□□□□□ -0.31
Rfc1P35601 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rfc1P35601 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rfc1P35601 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rfc1P35601 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rfc1P35601 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rfc1P35601 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rfc1P35601 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rfc1P35601 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rfc1P35601 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rfc1P35601 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rfc1P35601 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rfc1P35601 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rfc1P35601 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rfc1P35601 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Rfc1P35601 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
Rfc1P35601 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Rfc1P35601 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rfc1P35601 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rfc1P35601 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rfc1P35601 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC13.13□□□□□ -0.31
Rfc1P35601 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rfc1P35601 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rfc1P35601 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC13.13□□□□□ -0.31
Rfc1P35601 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Rfc1P35601 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rfc1P35601 Gm28719-201ENSMUST00000187779 1757 ntBASIC13.13□□□□□ -0.31
Rfc1P35601 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rfc1P35601 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC13.13□□□□□ -0.31
Rfc1P35601 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rfc1P35601 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
Rfc1P35601 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC13.13□□□□□ -0.31
Rfc1P35601 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
Rfc1P35601 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC13.13□□□□□ -0.31
Rfc1P35601 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC13.13□□□□□ -0.31
Rfc1P35601 Gm5354-201ENSMUST00000182417 973 ntBASIC13.13□□□□□ -0.31
Rfc1P35601 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Rfc1P35601 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC13.13□□□□□ -0.31
Rfc1P35601 AC073947.2-201ENSMUST00000215888 1130 ntBASIC13.13□□□□□ -0.31
Rfc1P35601 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rfc1P35601 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rfc1P35601 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rfc1P35601 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rfc1P35601 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rfc1P35601 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rfc1P35601 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rfc1P35601 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rfc1P35601 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rfc1P35601 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC13.13□□□□□ -0.31
Rfc1P35601 Gm38055-201ENSMUST00000195353 2217 ntBASIC13.13□□□□□ -0.31
Rfc1P35601 AC159195.3-201ENSMUST00000225162 2211 ntBASIC13.13□□□□□ -0.31
Rfc1P35601 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
Rfc1P35601 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Rfc1P35601 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rfc1P35601 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Rfc1P35601 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Rfc1P35601 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rfc1P35601 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rfc1P35601 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rfc1P35601 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rfc1P35601 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rfc1P35601 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rfc1P35601 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rfc1P35601 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rfc1P35601 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rfc1P35601 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Rfc1P35601 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rfc1P35601 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rfc1P35601 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rfc1P35601 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rfc1P35601 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rfc1P35601 Gm17244-201ENSMUST00000192482 3416 ntBASIC13.12□□□□□ -0.31
Rfc1P35601 Gm2420-201ENSMUST00000119864 2149 ntBASIC13.12□□□□□ -0.31
Rfc1P35601 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rfc1P35601 Ldb3-207ENSMUST00000227819 1499 ntBASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 77.8 ms