Protein–RNA interactions for Protein: P31649

Slc6a13, Sodium- and chloride-dependent GABA transporter 2, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a13P31649 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slc6a13P31649 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Slc6a13P31649 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC12.64□□□□□ -0.39
Slc6a13P31649 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC12.64□□□□□ -0.39
Slc6a13P31649 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.64□□□□□ -0.39
Slc6a13P31649 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Slc6a13P31649 Cts7-204ENSMUST00000225321 1257 ntBASIC12.64□□□□□ -0.39
Slc6a13P31649 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slc6a13P31649 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slc6a13P31649 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Slc6a13P31649 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Slc6a13P31649 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC12.64□□□□□ -0.39
Slc6a13P31649 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slc6a13P31649 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slc6a13P31649 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Slc6a13P31649 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slc6a13P31649 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slc6a13P31649 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slc6a13P31649 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slc6a13P31649 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Slc6a13P31649 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slc6a13P31649 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slc6a13P31649 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slc6a13P31649 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slc6a13P31649 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Slc6a13P31649 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Slc6a13P31649 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slc6a13P31649 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.63□□□□□ -0.39
Slc6a13P31649 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slc6a13P31649 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Slc6a13P31649 Gm24845-201ENSMUST00000158034 109 ntBASIC12.63□□□□□ -0.39
Slc6a13P31649 Gm2991-201ENSMUST00000173338 480 ntBASIC12.63□□□□□ -0.39
Slc6a13P31649 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slc6a13P31649 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC12.63□□□□□ -0.39
Slc6a13P31649 AC113031.8-201ENSMUST00000227856 631 ntBASIC12.63□□□□□ -0.39
Slc6a13P31649 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slc6a13P31649 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC12.63□□□□□ -0.39
Slc6a13P31649 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Slc6a13P31649 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Slc6a13P31649 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slc6a13P31649 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slc6a13P31649 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slc6a13P31649 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.63□□□□□ -0.39
Slc6a13P31649 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.63□□□□□ -0.39
Slc6a13P31649 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slc6a13P31649 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slc6a13P31649 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.63□□□□□ -0.39
Slc6a13P31649 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Slc6a13P31649 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Slc6a13P31649 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Slc6a13P31649 Gm2673-201ENSMUST00000120958 1608 ntBASIC12.62□□□□□ -0.39
Slc6a13P31649 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.62□□□□□ -0.39
Slc6a13P31649 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.62□□□□□ -0.39
Slc6a13P31649 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Slc6a13P31649 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Slc6a13P31649 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Slc6a13P31649 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Slc6a13P31649 Gm18222-201ENSMUST00000202416 1387 ntBASIC12.62□□□□□ -0.39
Slc6a13P31649 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Slc6a13P31649 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Slc6a13P31649 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Slc6a13P31649 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Slc6a13P31649 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Slc6a13P31649 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Slc6a13P31649 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Slc6a13P31649 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
Slc6a13P31649 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Slc6a13P31649 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
Slc6a13P31649 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.62□□□□□ -0.39
Slc6a13P31649 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC12.62□□□□□ -0.39
Slc6a13P31649 Gm27023-201ENSMUST00000182372 285 ntBASIC12.62□□□□□ -0.39
Slc6a13P31649 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.62□□□□□ -0.39
Slc6a13P31649 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC12.62□□□□□ -0.39
Slc6a13P31649 Gm9368-201ENSMUST00000219348 831 ntBASIC12.62□□□□□ -0.39
Slc6a13P31649 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Slc6a13P31649 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Slc6a13P31649 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Slc6a13P31649 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Slc6a13P31649 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Slc6a13P31649 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Slc6a13P31649 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.62□□□□□ -0.39
Slc6a13P31649 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Slc6a13P31649 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Slc6a13P31649 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Slc6a13P31649 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Slc6a13P31649 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Slc6a13P31649 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Slc6a13P31649 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Slc6a13P31649 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Slc6a13P31649 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Slc6a13P31649 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Slc6a13P31649 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Slc6a13P31649 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Slc6a13P31649 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Slc6a13P31649 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Slc6a13P31649 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Slc6a13P31649 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Slc6a13P31649 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Slc6a13P31649 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Slc6a13P31649 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms