Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Slc6a1P31648 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Slc6a1P31648 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Slc6a1P31648 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC10.74□□□□□ -0.69
Slc6a1P31648 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Slc6a1P31648 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC10.74□□□□□ -0.69
Slc6a1P31648 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Slc6a1P31648 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC10.74□□□□□ -0.69
Slc6a1P31648 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC10.74□□□□□ -0.69
Slc6a1P31648 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Slc6a1P31648 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Slc6a1P31648 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Slc6a1P31648 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC10.74□□□□□ -0.69
Slc6a1P31648 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Slc6a1P31648 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Slc6a1P31648 Gm27772-201ENSMUST00000184900 187 ntBASIC10.74□□□□□ -0.69
Slc6a1P31648 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC10.74□□□□□ -0.69
Slc6a1P31648 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Slc6a1P31648 Gm5279-201ENSMUST00000199575 745 ntBASIC10.74□□□□□ -0.69
Slc6a1P31648 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC10.74□□□□□ -0.69
Slc6a1P31648 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC10.74□□□□□ -0.69
Slc6a1P31648 AC155258.1-201ENSMUST00000219303 253 ntBASIC10.74□□□□□ -0.69
Slc6a1P31648 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Slc6a1P31648 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Slc6a1P31648 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Slc6a1P31648 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Slc6a1P31648 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Slc6a1P31648 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Slc6a1P31648 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Slc6a1P31648 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Slc6a1P31648 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Slc6a1P31648 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Slc6a1P31648 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Slc6a1P31648 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC10.74□□□□□ -0.69
Slc6a1P31648 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Slc6a1P31648 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC10.74□□□□□ -0.69
Slc6a1P31648 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Slc6a1P31648 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Slc6a1P31648 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Slc6a1P31648 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Slc6a1P31648 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Slc6a1P31648 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Slc6a1P31648 Gm43172-201ENSMUST00000202139 2137 ntBASIC10.73□□□□□ -0.69
Slc6a1P31648 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
Slc6a1P31648 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC10.73□□□□□ -0.69
Slc6a1P31648 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Slc6a1P31648 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
Slc6a1P31648 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Slc6a1P31648 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
Slc6a1P31648 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Slc6a1P31648 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Slc6a1P31648 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Slc6a1P31648 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Slc6a1P31648 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Slc6a1P31648 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Slc6a1P31648 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Slc6a1P31648 Gm45532-201ENSMUST00000210342 3620 ntBASIC10.73□□□□□ -0.69
Slc6a1P31648 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Slc6a1P31648 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Slc6a1P31648 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC10.73□□□□□ -0.69
Slc6a1P31648 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Slc6a1P31648 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
Slc6a1P31648 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Slc6a1P31648 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Slc6a1P31648 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC10.73□□□□□ -0.69
Slc6a1P31648 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC10.73□□□□□ -0.69
Slc6a1P31648 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Slc6a1P31648 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC10.73□□□□□ -0.69
Slc6a1P31648 Gm37748-201ENSMUST00000194379 1140 ntBASIC10.73□□□□□ -0.69
Slc6a1P31648 Gm6745-201ENSMUST00000199216 526 ntBASIC10.73□□□□□ -0.69
Slc6a1P31648 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC10.73□□□□□ -0.69
Slc6a1P31648 Gm7653-201ENSMUST00000214567 508 ntBASIC10.73□□□□□ -0.69
Slc6a1P31648 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC10.73□□□□□ -0.69
Slc6a1P31648 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC10.73□□□□□ -0.69
Slc6a1P31648 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Slc6a1P31648 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Slc6a1P31648 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Slc6a1P31648 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Slc6a1P31648 Gm37324-201ENSMUST00000194500 4504 ntBASIC10.73□□□□□ -0.69
Slc6a1P31648 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Slc6a1P31648 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Slc6a1P31648 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Slc6a1P31648 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC10.73□□□□□ -0.69
Slc6a1P31648 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Slc6a1P31648 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Slc6a1P31648 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Slc6a1P31648 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC10.73□□□□□ -0.69
Slc6a1P31648 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Slc6a1P31648 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Slc6a1P31648 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Slc6a1P31648 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Slc6a1P31648 AC161252.3-201ENSMUST00000225465 1549 ntBASIC10.73□□□□□ -0.69
Slc6a1P31648 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Slc6a1P31648 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Slc6a1P31648 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC10.73□□□□□ -0.69
Slc6a1P31648 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Slc6a1P31648 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Slc6a1P31648 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Slc6a1P31648 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Slc6a1P31648 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms