Protein–RNA interactions for Protein: P31313

Hoxc11, Homeobox protein Hox-C11, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc11P31313 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC12.12□□□□□ -0.47
Hoxc11P31313 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxc11P31313 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Hoxc11P31313 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Hoxc11P31313 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC12.12□□□□□ -0.47
Hoxc11P31313 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxc11P31313 Gm10782-202ENSMUST00000223775 1480 ntBASIC12.12□□□□□ -0.47
Hoxc11P31313 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxc11P31313 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.12□□□□□ -0.47
Hoxc11P31313 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxc11P31313 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.12□□□□□ -0.47
Hoxc11P31313 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxc11P31313 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxc11P31313 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxc11P31313 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxc11P31313 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxc11P31313 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxc11P31313 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxc11P31313 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxc11P31313 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.11□□□□□ -0.47
Hoxc11P31313 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxc11P31313 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxc11P31313 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxc11P31313 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxc11P31313 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxc11P31313 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxc11P31313 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxc11P31313 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxc11P31313 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxc11P31313 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxc11P31313 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxc11P31313 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxc11P31313 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxc11P31313 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxc11P31313 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxc11P31313 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxc11P31313 Gm12058-201ENSMUST00000118614 437 ntBASIC12.11□□□□□ -0.47
Hoxc11P31313 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxc11P31313 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.11□□□□□ -0.47
Hoxc11P31313 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.11□□□□□ -0.47
Hoxc11P31313 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Hoxc11P31313 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxc11P31313 Gm18827-201ENSMUST00000188341 790 ntBASIC12.11□□□□□ -0.47
Hoxc11P31313 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC12.11□□□□□ -0.47
Hoxc11P31313 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.11□□□□□ -0.47
Hoxc11P31313 Gm45925-201ENSMUST00000218882 744 ntBASIC12.11□□□□□ -0.47
Hoxc11P31313 Gm18615-201ENSMUST00000222919 1031 ntBASIC12.11□□□□□ -0.47
Hoxc11P31313 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxc11P31313 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxc11P31313 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Hoxc11P31313 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.11□□□□□ -0.47
Hoxc11P31313 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxc11P31313 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxc11P31313 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Hoxc11P31313 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxc11P31313 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxc11P31313 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Hoxc11P31313 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.11□□□□□ -0.47
Hoxc11P31313 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxc11P31313 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxc11P31313 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxc11P31313 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxc11P31313 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxc11P31313 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Hoxc11P31313 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.11□□□□□ -0.47
Hoxc11P31313 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxc11P31313 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxc11P31313 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxc11P31313 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.11□□□□□ -0.47
Hoxc11P31313 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxc11P31313 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Hoxc11P31313 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC12.1□□□□□ -0.47
Hoxc11P31313 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxc11P31313 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxc11P31313 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC12.1□□□□□ -0.47
Hoxc11P31313 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxc11P31313 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxc11P31313 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxc11P31313 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxc11P31313 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Hoxc11P31313 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Hoxc11P31313 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Hoxc11P31313 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxc11P31313 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxc11P31313 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxc11P31313 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.1□□□□□ -0.47
Hoxc11P31313 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxc11P31313 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxc11P31313 Gm23270-201ENSMUST00000104055 131 ntBASIC12.1□□□□□ -0.47
Hoxc11P31313 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxc11P31313 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxc11P31313 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxc11P31313 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC12.1□□□□□ -0.47
Hoxc11P31313 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.1□□□□□ -0.47
Hoxc11P31313 Gm11930-201ENSMUST00000117788 190 ntBASIC12.1□□□□□ -0.47
Hoxc11P31313 Gm12715-201ENSMUST00000121430 1128 ntBASIC12.1□□□□□ -0.47
Hoxc11P31313 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC12.1□□□□□ -0.47
Hoxc11P31313 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Hoxc11P31313 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxc11P31313 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms