Protein–RNA interactions for Protein: P22227

Zfp42, Zinc finger protein 42, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp42P22227 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC13.12□□□□□ -0.31
Zfp42P22227 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
Zfp42P22227 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zfp42P22227 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Zfp42P22227 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Zfp42P22227 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zfp42P22227 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zfp42P22227 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC13.12□□□□□ -0.31
Zfp42P22227 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Zfp42P22227 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zfp42P22227 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Zfp42P22227 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zfp42P22227 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
Zfp42P22227 Gm13369-201ENSMUST00000119442 987 ntBASIC13.12□□□□□ -0.31
Zfp42P22227 Gm11803-201ENSMUST00000119966 444 ntBASIC13.12□□□□□ -0.31
Zfp42P22227 Gm11637-201ENSMUST00000120601 592 ntBASIC13.12□□□□□ -0.31
Zfp42P22227 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC13.12□□□□□ -0.31
Zfp42P22227 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC13.12□□□□□ -0.31
Zfp42P22227 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC13.12□□□□□ -0.31
Zfp42P22227 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Zfp42P22227 Gm17794-201ENSMUST00000220252 955 ntBASIC13.12□□□□□ -0.31
Zfp42P22227 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC13.12□□□□□ -0.31
Zfp42P22227 CT030657.3-201ENSMUST00000222707 1200 ntBASIC13.12□□□□□ -0.31
Zfp42P22227 Cdk7-205ENSMUST00000225990 1159 ntBASIC13.12□□□□□ -0.31
Zfp42P22227 AC154239.3-201ENSMUST00000226933 674 ntBASIC13.12□□□□□ -0.31
Zfp42P22227 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Zfp42P22227 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Zfp42P22227 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Zfp42P22227 Gm44758-201ENSMUST00000206096 2068 ntBASIC13.12□□□□□ -0.31
Zfp42P22227 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zfp42P22227 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zfp42P22227 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zfp42P22227 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zfp42P22227 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zfp42P22227 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zfp42P22227 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zfp42P22227 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zfp42P22227 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zfp42P22227 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Zfp42P22227 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zfp42P22227 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zfp42P22227 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zfp42P22227 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zfp42P22227 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Zfp42P22227 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zfp42P22227 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zfp42P22227 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Zfp42P22227 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zfp42P22227 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zfp42P22227 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zfp42P22227 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zfp42P22227 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Zfp42P22227 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zfp42P22227 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zfp42P22227 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zfp42P22227 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Zfp42P22227 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC13.11□□□□□ -0.31
Zfp42P22227 Gm12203-201ENSMUST00000118235 598 ntBASIC13.11□□□□□ -0.31
Zfp42P22227 Gm12209-201ENSMUST00000120089 596 ntBASIC13.11□□□□□ -0.31
Zfp42P22227 Mir1894-201ENSMUST00000122802 81 ntBASIC13.11□□□□□ -0.31
Zfp42P22227 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Zfp42P22227 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC13.11□□□□□ -0.31
Zfp42P22227 Gm37042-201ENSMUST00000193816 581 ntBASIC13.11□□□□□ -0.31
Zfp42P22227 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC13.11□□□□□ -0.31
Zfp42P22227 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Zfp42P22227 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC13.11□□□□□ -0.31
Zfp42P22227 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC13.11□□□□□ -0.31
Zfp42P22227 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zfp42P22227 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Zfp42P22227 AC169036.1-201ENSMUST00000227994 296 ntBASIC13.11□□□□□ -0.31
Zfp42P22227 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zfp42P22227 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Zfp42P22227 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Zfp42P22227 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Zfp42P22227 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Zfp42P22227 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC13.11□□□□□ -0.31
Zfp42P22227 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC13.11□□□□□ -0.31
Zfp42P22227 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zfp42P22227 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zfp42P22227 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zfp42P22227 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zfp42P22227 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zfp42P22227 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Zfp42P22227 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zfp42P22227 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Zfp42P22227 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Zfp42P22227 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Zfp42P22227 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC13.1□□□□□ -0.31
Zfp42P22227 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Zfp42P22227 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Zfp42P22227 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Zfp42P22227 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Zfp42P22227 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Zfp42P22227 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Zfp42P22227 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Zfp42P22227 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Zfp42P22227 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Zfp42P22227 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Zfp42P22227 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Zfp42P22227 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms